RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 RALBP11234 206 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 SLC8A1P32418 973 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 NUMBP49757 651 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 WNT3AP56704 352 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 SLC10A7Q0GE19 358 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 ELAVL2Q12926 359 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 MARC1Q5VT66 337 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 RANBP10Q6VN20 620 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 ZC3HC1Q86WB0 502 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 DENND6AQ8IWF6 608 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 SLC25A41Q8N5S1 370 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 PTCD3Q96EY7 689 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 NSL1Q96IY1 281 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 SPATA17Q96L03 361 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 TUBB6Q9BUF5 446 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 SLC25A51Q9H1U9 297 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 RHOJQ9H4E5 214 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 CDY1Q9Y6F8 540 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 H7C4K7 107 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 HOXA2O43364 376 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 TLR5O60602 858 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 CCDC22O60826 627 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 AHSGP02765 367 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 GRK2P25098 689 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 PGGT1BP53609 377 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 CTBP1Q13363 440 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 USP10Q14694 798 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 E2F5Q15329 346 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 CNGA3Q16281 694 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 ANKS3Q6ZW76 656 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 CLEC14AQ86T13 490 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 GPR22Q99680 433 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 EBF4Q9BQW3 602 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
NEK3-205ENST00000610828 MYLKQ15746 1914 aa13.81□□□□□ -0.2
NEK3-205ENST00000610828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 CALB2P22676 271 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 GABRB3P28472 473 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 CD86P42081 329 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 MPP1Q00013 466 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 CCDC117Q8IWD4 279 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 MAGEC3Q8TD91 643 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 AGAP11Q8TF27 550 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 NSMCE1Q8WV22 266 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 PTCD2Q8WV60 388 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 NMRAL1Q9HBL8 299 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 PHGDHO43175 533 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 RAMP2O60895 175 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 FKTNO75072 461 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 ATF6P18850 670 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 PAMP19021 973 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 ARNTP27540 789 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 OR1E1P30953 314 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 AVPR1AP37288 418 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 HADHAP40939 763 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 ARCN1P48444 511 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 ALDH18A1P54886 795 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 CCL23P55773 120 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 CDK18Q07002 472 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 SMARCB1Q12824 385 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 POLD3Q15054 466 aaPredicted RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 UGP2Q16851 508 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.8□□□□□ -0.2
NEK3-205ENST00000610828 IMP4Q96G21 291 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 BTBD10Q9BSF8 475 aa13.8□□□□□ -0.2
NEK3-205ENST00000610828 CPSF2Q9P2I0 782 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 MKI67P46013 3256 aaKnown RBP13.8□□□□□ -0.2
NEK3-205ENST00000610828 GREB1Q4ZG55 1949 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 UPP2O95045 317 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 IGLV3-27P01718 113 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ARRB2P32121 409 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ETFBP38117 255 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ABCE1P61221 599 aaKnown RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 DSC2Q02487 901 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 THOC5Q13769 683 aaKnown RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 KDELC1Q6UW63 502 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ATG14Q6ZNE5 492 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 CNTN4Q8IWV2 1026 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 CRIPAKQ8N1N5 446 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 FAM13CQ8NE31 585 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 SORT1Q99523 831 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 MIPEPQ99797 713 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 L3MBTL1Q9Y468 752 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms