RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GPRIN1Q7Z2K8 1008 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 ATXN10Q9UBB4 475 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 RIMS3Q9UJD0 308 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 RAP2CQ9Y3L5 183 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 ARHGEF37A1IGU5 675 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 AKAP10O43572 662 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 MOCS2O96007 188 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-216ENST00000610401 KCNA5P22460 613 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 ARMCX2Q7L311 632 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 DRAXINQ8NBI3 349 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-216ENST00000610401 HSFX1Q9UBD0 423 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 SHROOM3Q8TF72 1996 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 SUPT3HO75486 399 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 GPC4O75487 556 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 SLC4A1P02730 911 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 STT3AP46977 705 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF789Q5FWF6 425 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 LIPMQ5VYY2 423 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 OSTM1Q86WC4 334 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF354CQ86Y25 554 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 EPS15L1Q9UBC2 864 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 RBPJLQ9UBG7 517 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 MEIS3P2A8K0S8 358 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 HUS1O60921 280 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 SLC5A2P31639 672 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 CASP2P42575 452 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 PLOD1Q02809 727 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-216ENST00000610401 CACNB2Q08289 660 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-216ENST00000610401 GRM2Q14416 872 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 OTUD1Q5VV17 481 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-216ENST00000610401 CNSTQ6PJW8 725 aa20.69■□□□□ 0.9
SSBP3-216ENST00000610401 AP2A1O95782 977 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 TFPTP0C1Z6 253 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 SLC35E2BP0CK96 405 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 MLNP12872 115 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 CES1P23141 567 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF470Q6ECI4 717 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 ITPRIPL1Q6GPH6 555 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 CHST15Q7LFX5 561 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 LSMEM2Q8N112 164 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 LPGAT1Q92604 370 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 SIKE1Q9BRV8 207 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 STN1Q9H668 368 aaKnown RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 C6orf203Q9P0P8 240 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 TNFAIP8O95379 198 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 YBX3P16989 372 aaKnown RBP eCLIP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 HOXA11P31270 313 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 AFF1P51825 1210 aaKnown RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 SLC12A2P55011 1212 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 PSME3P61289 254 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 MFSD6LQ8IWD5 586 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 CENPLQ8N0S6 344 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 HASPINQ8TF76 798 aa20.68■□□□□ 0.9
SSBP3-216ENST00000610401 SOX17Q9H6I2 414 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-216ENST00000610401 RGS2P41220 211 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 GRIK4Q16099 956 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 RBM20Q5T481 1227 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 TXNDC5Q8NBS9 432 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 B3GALNT2Q8NCR0 500 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 CAMKK2Q96RR4 588 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 ACOT9Q9Y305 439 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 PGK1P00558 417 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 GNAO1P09471 354 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 MYL4P12829 197 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 TAS2R39P59534 338 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 ITKQ08881 620 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 INSCQ1MX18 579 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 HABP4Q5JVS0 413 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 RP9Q8TA86 221 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 CENPIQ92674 756 aaPredicted RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 TKTL2Q9H0I9 626 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 VRTNQ9H8Y1 702 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 AP4S1Q9Y587 144 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 SMIM31A0A1B0GVY4 71 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 TCAF2A6NFQ2 919 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 DDHD2O94830 711 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 GRIA3P42263 894 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 SNX16P57768 344 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 ANO4Q32M45 955 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 MGAT5BQ3V5L5 792 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 C4orf22Q6V702 233 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 ZC3HC1Q86WB0 502 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 TSPAN14Q8NG11 270 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 FICDQ9BVA6 458 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 SENP6Q9GZR1 1112 aaPredicted RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 PLEKHA5Q9HAU0 1116 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 OR12D3Q9UGF7 316 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 DSEQ9UL01 958 aa20.67■□□□□ 0.9
SSBP3-216ENST00000610401 FNDC3AQ9Y2H6 1198 aaKnown RBP20.67■□□□□ 0.9
SSBP3-216ENST00000610401 FAM95CA0A1B0GW59 222 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 CHRM3P20309 590 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 ADRA1BP35368 520 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 C1QTNF8P60827 252 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 PRAMEF19Q5SWL8 479 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 HEXDCQ8WVB3 486 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 DRC3Q9H069 523 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 FAM96AQ9H5X1 160 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF711Q9Y462 761 aa20.66■□□□□ 0.9
SSBP3-216ENST00000610401 SMIM28A0A1B0GU29 152 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms