RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-208ENST00000608287 A0A1W2PR77 199 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 ENDOD1O94919 500 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 WNT1P04628 370 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 GPD1P21695 349 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 RFC1P35251 1148 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-208ENST00000608287 PBX1P40424 430 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 PTPN9P43378 593 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 NUMBP49757 651 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 OXCT1P55809 520 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 ZNF177Q13360 481 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-208ENST00000608287 SLC12A1Q13621 1099 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 NFKBIBQ15653 356 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 RAB6CQ53S08 254 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 PPP1R2P3Q6NXS1 205 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 LRRC31Q6UY01 552 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 ZNF571Q7Z3V5 609 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-208ENST00000608287 MCOLN2Q8IZK6 566 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 MFSD2AQ8NA29 543 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 RAB6CQ9H0N0 254 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 POLR1BQ9H9Y6 1135 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 TAS2R14Q9NYV8 317 aa19.67■□□□□ 0.74
SGMS1-208ENST00000608287 ARID1BQ8NFD5 2236 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-208ENST00000608287 ANKRD62A6NC57 917 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 SIGLEC16A6NMB1 481 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CLDN11O75508 207 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 RNASEH2AO75792 299 aaKnown RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 SKILP12757 684 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 MZF1P28698 734 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 PRKCIP41743 596 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CTSOP43234 321 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CDH4P55283 916 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 ECT2LQ008S8 904 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 ZNF211Q13398 564 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CST6Q15828 149 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 PROX2Q3B8N5 592 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 C5orf22Q49AR2 442 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 ACBD5Q5T8D3 534 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 RNF219Q5W0B1 726 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 NAPEPLDQ6IQ20 393 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CXorf57Q6NSI4 855 aaKnown RBP19.66■□□□□ 0.74
SGMS1-208ENST00000608287 WDR59Q6PJI9 974 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 XKR5Q6UX68 686 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 STRADAQ7RTN6 431 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 KDM1BQ8NB78 822 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 FAM172AQ8WUF8 416 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 CPLX3Q8WVH0 158 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 GRAMD1AQ96CP6 724 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 C1orf74Q96LT6 269 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 HAPLN3Q96S86 360 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 IL17BQ9UHF5 180 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 ERVW-1Q9UQF0 538 aa19.66■□□□□ 0.74
SGMS1-208ENST00000608287 A0A1W2PQJ5 194 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 SRGAP2O75044 1071 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 CNTN5O94779 1100 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 TPM3P06753 285 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 SRPRAP08240 638 aaKnown RBP19.65■□□□□ 0.74
SGMS1-208ENST00000608287 RRM1P23921 792 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 SRSF1Q07955 248 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGMS1-208ENST00000608287 BNIP3Q12983 259 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 ARL13BQ3SXY8 428 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 IGF2-ASQ6U949 168 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 PRPF39Q86UA1 669 aaKnown RBP19.65■□□□□ 0.74
SGMS1-208ENST00000608287 ZNF683Q8IZ20 524 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 MYO19Q96H55 970 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 MRGPRX3Q96LB0 322 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 MCEEQ96PE7 176 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 PPP1R9BQ96SB3 815 aa19.65■□□□□ 0.74
SGMS1-208ENST00000608287 XPO4Q9C0E2 1151 aaKnown RBP19.65■□□□□ 0.74
SGMS1-208ENST00000608287 A0A1W2PP55 124 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 TCRBV5S1A1TA0A578 114 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 ADH1BP00325 375 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 MPOP05164 745 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 GP1BAP07359 652 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 HNRNPA1L2Q32P51 320 aaKnown RBP19.64■□□□□ 0.73
SGMS1-208ENST00000608287 ALFQ53S48 1182 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 TDRD12Q587J7 1177 aaKnown RBP19.64■□□□□ 0.73
SGMS1-208ENST00000608287 DCUN1D2Q6PH85 259 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 CENPIQ92674 756 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-208ENST00000608287 IQCDQ96DY2 449 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 VCPIP1Q96JH7 1222 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 RPL10LQ96L21 214 aaKnown RBP19.64■□□□□ 0.73
SGMS1-208ENST00000608287 NEUROG2Q9H2A3 272 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 MTG2Q9H4K7 406 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 USP29Q9HBJ7 922 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 MPP6Q9NZW5 540 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 DMTF1Q9Y222 760 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 PCDHB1Q9Y5F3 818 aa19.64■□□□□ 0.73
SGMS1-208ENST00000608287 TARSL2A2RTX5 802 aaKnown RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 DRGXA6NNA5 263 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 K7ENP7 123 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 DDX3XO00571 662 aaKnown RBP eCLIP19.63■□□□□ 0.733e-13■■□□□ 12.4
SGMS1-208ENST00000608287 RIOK3O14730 519 aaKnown RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 MID1O15344 667 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 USP12O75317 370 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 RHOCP08134 193 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 ALPPL2P10696 532 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 RBMS1P29558 406 aaKnown RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 ADRA1BP35368 520 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 NNMTP40261 264 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms