RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ARMCX2Q7L311 632 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 R3HCC1LQ7Z5L2 792 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KCTD20Q7Z5Y7 419 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PTRH1Q86Y79 214 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MFSD2AQ8NA29 543 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SIMC1Q8NDZ2 872 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SLC30A5Q8TAD4 765 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 RAB3IL1Q8TBN0 382 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 CKAP2Q8WWK9 683 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MAP4K1Q92918 833 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MTFMTQ96DP5 389 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MAP6Q96JE9 813 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 FAM84AQ96KN4 292 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TMEM74Q96NL1 305 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ISCA1Q9BUE6 129 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SPACA1Q9HBV2 294 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TM9SF3Q9HD45 589 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 USP40Q9NVE5 1235 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TAB2Q9NYJ8 693 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ATP6V1HQ9UI12 483 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ARHGAP26Q9UNA1 814 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 AP3M1Q9Y2T2 418 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SLIT2O94813 1529 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ACOD1A6NK06 481 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ATP6V1G2-DDX39BF2Z307 99 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 J3QW42 95 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KPNA4O00629 521 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SULT1B1O43704 296 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 CCDC22O60826 627 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PRKD3O94806 890 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 FAM228BP0C875 321 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MAP2K3P46734 347 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TPTEP56180 551 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KCNQ4P56696 695 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KCNAB2Q13303 367 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ERV3-1Q14264 604 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SLC39A14Q15043 492 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF805Q5CZA5 627 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 GRTP1Q5TC63 336 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 WDR59Q6PJI9 974 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 DBX2Q6ZNG2 339 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TMPRSS9Q7Z410 1059 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PRUNE1Q86TP1 453 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PALM2Q8IXS6 379 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF486Q96H40 463 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PSD2Q9BQI7 771 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TLR10Q9BXR5 811 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF717Q9BY31 904 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TUFT1Q9NNX1 390 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 BABAM1Q9NWV8 329 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MRPL39Q9NYK5 338 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KCNH3Q9ULD8 1083 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 STARD13Q9Y3M8 1113 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MAP3K15Q6ZN16 1313 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 CASZ1Q86V15 1759 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 FAM237AA0A1B0GTK4 181 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PRAMEF22A3QJZ6 481 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PMS2P1A4D2B8 440 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 URADA6NGE7 173 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 F8W8V4 182 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 STX16-NPEPL1H3BU86 382 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
LINC01109-201ENST00000603837 GYG2O15488 501 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 GSC2O15499 205 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SCO2O43819 266 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SPAG7O75391 227 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 MYO1DO94832 1006 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 BMP10O95393 424 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 CTDNEP1O95476 244 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PROCP04070 461 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 DLATP10515 647 aaKnown RBP4.79□□□□□ -1.64
LINC01109-201ENST00000603837 ICAM2P13598 275 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 ANXA8P13928 327 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 IL10P22301 178 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 TUBG1P23258 451 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 CTSSP25774 331 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 RFC1P35251 1148 aaPredicted RBP4.79□□□□□ -1.64
LINC01109-201ENST00000603837 BTDP43251 543 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 RAP1GDS1P52306 607 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 ACTR1AP61163 376 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 ATP6V0D1P61421 351 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 MRPS9P82933 396 aaKnown RBP4.79□□□□□ -1.64
LINC01109-201ENST00000603837 TEFQ10587 303 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 DLG1Q12959 904 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PPIL2Q13356 520 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 GRIN2CQ14957 1233 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SMAD2Q15796 467 aaKnown RBP4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PCGF3Q3KNV8 242 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SFT2D3Q587I9 215 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 SNAP47Q5SQN1 464 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 C6orf163Q5TEZ5 329 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 ANXA8L1Q5VT79 327 aa4.79□□□□□ -1.64
LINC01109-201ENST00000603837 TNS3Q68CZ2 1445 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms