RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 COL13A1Q5TAT6 717 aaPredicted RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ATPAF1Q5TC12 328 aaPredicted RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 BTBD8Q5XKL5 378 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 LRRC8BQ6P9F7 803 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DEGS2Q6QHC5 323 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 USP49Q70CQ1 688 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TLK2Q86UE8 772 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 LONP2Q86WA8 852 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ZBED8Q8IZ13 594 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC38A6Q8IZM9 456 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ARL14Q8N4G2 192 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 WDTC1Q8N5D0 677 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SPPL3Q8TCT6 385 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PLEKHO2Q8TD55 490 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NAT14Q8WUY8 206 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GAB3Q8WWW8 586 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 THRSPQ92748 146 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 STAMQ92783 540 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC47A1Q96FL8 570 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PGAP3Q96FM1 320 aaPredicted RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FBXL18Q96ME1 805 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CFAP57Q96MR6 1250 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 QRSL1Q9H0R6 528 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ATP13A3Q9H7F0 1226 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FANCEQ9HB96 536 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 IL21RQ9HBE5 538 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 EHD2Q9NZN4 543 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ADAM22Q9P0K1 906 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 IL19Q9UHD0 177 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 INTS6Q9UL03 887 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NPFFR2Q9Y5X5 522 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM208AQ9UK61 1670 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SMIM31A0A1B0GVY4 71 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 EIF4E1BA6NMX2 242 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FADS2P1A8MWK0 482 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SPATA31C2B4DYI2 1134 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 BUB1O43683 1085 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT37O76014 449 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CALM1P0DP23 149 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CALM2P0DP24 149 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CALM3P0DP25 149 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NFKB1P19838 968 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NR1D1P20393 614 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 AVPR2P30518 371 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 IFNA8P32881 189 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GPC1P35052 558 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 BMI1P35226 326 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PSMC2P35998 433 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TXKP42681 527 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GALK1P51570 392 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 POLGP54098 1239 aaPredicted RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ABATP80404 500 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DNAJC3Q13217 504 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 RAPSNQ13702 412 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 USP10Q14694 798 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SEC23AQ15436 765 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TARBP2Q15633 366 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KYAT1Q16773 422 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 C2orf76Q3KRA6 126 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP27C1Q4G0S4 372 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SPECC1LQ69YQ0 1117 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT28Q7Z3Y7 464 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 LZTR1Q8N653 840 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FRMD1Q8N878 549 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 EXD1Q8NHP7 514 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 AENQ8WTP8 325 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GATA6Q92908 595 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 MR1Q95460 341 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 C1GALT1C1Q96EU7 318 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TMA16Q96EY4 203 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 APIPQ96GX9 242 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PGBD1Q96JS3 809 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CEP19Q96LK0 163 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SPZ1Q9BXG8 430 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GPR61Q9BZJ8 451 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 WDR26Q9H7D7 661 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 EPB41L5Q9HCM4 733 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 RBM12Q9NTZ6 932 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SUSD2Q9UGT4 822 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KLHL3Q9UH77 587 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TLK1Q9UKI8 766 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ATP10DQ9P241 1426 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TTC26A0AVF1 554 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MED7O43513 233 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TRAPPC3O43617 180 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PDGFBP01127 241 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FYNP06241 537 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PAEPP09466 180 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CLEC2LP0C7M8 214 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MYL6BP14649 208 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CKMT2P17540 419 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 POLR2CP19387 275 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 AKAP5P24588 427 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NUP62P37198 522 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GSSP48637 474 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms