RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TMLHEQ9NVH6 421 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 CNTFP26441 200 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
CSMD1-216ENST00000602557 ZNF544Q6NX49 715 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 ZNF570Q96NI8 536 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 TBC1D24Q9ULP9 559 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 SHOC2Q9UQ13 582 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 H3BM21 787 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 SIN3BO75182 1162 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 ERVK-10P10266 1014 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 SSTR1P30872 391 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 DSG3P32926 999 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 PLK1P53350 603 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 BNC1Q01954 994 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 MGAT5Q09328 741 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 MPZL3Q6UWV2 235 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 RXFP2Q8WXD0 754 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 PGM2Q96G03 612 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 ARHGAP20Q9P2F6 1191 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 RAPGEFL1Q9UHV5 662 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 UBQLN1Q9UMX0 589 aaKnown RBP8.8□□□□□ -1
CSMD1-216ENST00000602557 PREX1Q8TCU6 1659 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 RBM47A0AV96 593 aaKnown RBP8.8□□□□□ -1
CSMD1-216ENST00000602557 ZNF879B4DU55 563 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 I3L521 148 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 GRK4P32298 578 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 ABCG1P45844 678 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 PTSQ03393 145 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 FGD3Q5JSP0 725 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 TFAP2DQ7Z6R9 452 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 RASSF5Q8WWW0 418 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 TCF12Q99081 682 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 PHF11Q9UIL8 331 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 KLHL33A6NCF5 533 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 TPBGLP0DKB5 382 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 SLC2A4P14672 509 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 BLOC1S4Q9NUP1 217 aa8.8□□□□□ -1
CSMD1-216ENST00000602557 INTS10Q9NVR2 710 aaKnown RBP8.8□□□□□ -1
CSMD1-216ENST00000602557 CCNE2O96020 404 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 CLTBP09497 229 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 TAL1P17542 331 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 PPP2R1BP30154 601 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 HALP42357 657 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 BTN3A2P78410 334 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 DPYSQ14117 519 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 TIMM50Q3ZCQ8 353 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 ANKS6Q68DC2 871 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 FBXO21O94952 628 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 YWHAZP63104 245 aaKnown RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 MID1IP1Q9NPA3 183 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 J3QRK9 145 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GP5P40197 560 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GSCP56915 257 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 BNIP1Q12981 228 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 PEX6Q13608 980 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 AAGABQ6PD74 315 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 FBXL8Q96CD0 374 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 HACL1Q9UJ83 578 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 NDUFAF1Q9Y375 327 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 DNASE1L3Q13609 305 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 FBXO33Q7Z6M2 555 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 KCNMB4Q86W47 210 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GRPEL2Q8TAA5 225 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 KCNS3Q9BQ31 491 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 MYH14Q7Z406 1995 aaKnown RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 CHURC1-FNTBB4DL54 471 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 VARSP26640 1264 aaKnown RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 CYP4X1Q8N118 509 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 FNDC5Q8NAU1 212 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 ZNF540Q8NDQ6 660 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GTF3C2Q8WUA4 911 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 EDEM1Q92611 657 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 DEFB129Q9H1M3 183 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 PCDH10Q9P2E7 1040 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 CXCL8P10145 99 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 AFTPHQ6ULP2 937 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 SPESP1Q6UW49 350 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 COMMD2Q86X83 199 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 DENND2DQ9H6A0 471 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 SAGE2PA6NJ88 616 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 H7C4K7 107 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 AXIN1O15169 862 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 LYPLA1O75608 230 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 VDRP11473 427 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GUCA1AP43080 201 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 ARF3P61204 181 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 ARF1P84077 181 aaKnown RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 TROAPQ12815 778 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GALNT5Q7Z7M9 940 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 POMKQ9H5K3 350 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 PCDH9Q9HC56 1237 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 NKIRAS2Q9NYR9 191 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 FAM220BPB1ANY3 271 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 TPH1P17752 444 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 AMPD1P23109 780 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 ZSCAN5AQ9BUG6 496 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 KBTBD4Q9NVX7 518 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 SPATA7Q9P0W8 599 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 GPR75-ASB3A0A0A6YYF3 556 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms