RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 THRAP10827 490 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 CACNA2D1P54289 1103 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SLC25A3Q00325 362 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 CCT7Q99832 543 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SEPT3Q9UH03 358 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
ZNF558-207ENST00000601372 A0A1W2PRU2 124 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 INPPL1O15357 1258 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 ANKRD22Q5VYY1 191 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 C16orf70Q9BSU1 422 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 RNF39Q9H2S5 420 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 EVA1BQ9NVM1 165 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 PKD2L2Q9NZM6 624 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 DEC1Q9P2X7 70 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 RNF112Q9ULX5 631 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 PDZK1P1A8MUH7 402 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 ENPP3O14638 875 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 KRT36O76013 467 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 GOT1P17174 413 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 PDK4Q16654 411 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 TMCO2Q7Z6W1 182 aaPredicted RBP11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SLC41A1Q8IVJ1 513 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
ZNF558-207ENST00000601372 FZD8Q9H461 694 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 SNX13Q9Y5W8 968 aa11.21□□□□□ -0.61
ZNF558-207ENST00000601372 DCXO43602 365 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 H2AFYO75367 372 aaKnown RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 ERVK-21P61565 698 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 PTK2BQ14289 1009 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 SLC1A5Q15758 541 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 RNF168Q8IYW5 571 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 CLEC4FQ8N1N0 589 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 ST13P5Q8NFI4 369 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 CNDP1Q96KN2 507 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 KIAA1522Q9P206 1035 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 BAIAP3O94812 1187 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 PSMG1O95456 288 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 FOSL2P15408 326 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 IYDQ6PHW0 289 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 CPNE1Q99829 537 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 TIMM44O43615 452 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 MTA2O94776 668 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 MPOP05164 745 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 AGAP9Q5VTM2 703 aa11.21□□□□□ -0.62
ZNF558-207ENST00000601372 ZNF513Q8N8E2 541 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-207ENST00000601372 SYNDIG1LA6NDD5 238 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PROCP04070 461 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SERPINE1P05121 402 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 ABHD2P08910 425 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 LMO2P25791 158 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 ZDHHC24Q6UX98 284 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 C12orf56Q8IXR9 622 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 RNF157Q96PX1 679 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 APPL1Q9UKG1 709 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 A0A096LPK6 155 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TMEM191CA6NGB0 347 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PHGDHO43175 533 aaKnown RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SLC11A1P49279 550 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 IRX1P78414 480 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 MPPE1Q53F39 396 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SPANXN3Q5MJ09 141 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 RINLQ6ZS11 566 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SAMD11Q96NU1 681 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 CPXM1Q96SM3 734 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 LGMNQ99538 433 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SEMA6AQ9H2E6 1030 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 SNX5Q9Y5X3 404 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TCRBV9S1A1TA0A576 114 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 MYO1GB0I1T2 1018 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 ARHGDIAP52565 204 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PTPN20Q4JDL3 420 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 MARK2Q7KZI7 788 aaKnown RBP11.2□□□□□ -0.62
ZNF558-207ENST00000601372 PCDHB9Q9Y5E1 797 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TBC1D3DA0A087WVF3 549 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TBC1D3IA0A087WXS9 549 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TBC1D3EA0A087X179 549 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TBC1D3KA0A087X1G2 549 aa11.2□□□□□ -0.62
ZNF558-207ENST00000601372 TBC1D3FA6NER0 549 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms