RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935		M0QYV0	167 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	RNF225	M0QZC1	329 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	YY2	O15391	372 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	SNAP91	O60641	907 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	ZNF821	O75541	412 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	TSHR	P16473	764 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	RRM1	P23921	792 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	RPIA	P49247	311 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	RPS21	P63220	83 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	CCL7	P80098	99 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	CNGA2	Q16280	664 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	ARSI	Q5FYB1	569 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	KIAA1161	Q6NSJ0	714 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	SDR16C5	Q8N3Y7	309 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	KY	Q8NBH2	561 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	GRIN3A	Q8TCU5	1115 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	CCDC74A	Q96AQ1	378 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	TBATA	Q96M53	351 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	LENG8	Q96PV6	779 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	GFM1	Q96RP9	751 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	C1QTNF2	Q9BXJ5	285 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	SPAST	Q9UBP0	616 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	VPS28	Q9UK41	221 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	LOXL2	Q9Y4K0	774 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	WASF2	Q9Y6W5	498 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	CACNA1D	Q01668	2161 aa		11.27	□□□□□ -0.6
NUP62-222	ENST00000600935	LEFTY1	O75610	366 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	TRUB2	O95900	331 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	PRNP	P04156	253 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	PAEP	P09466	180 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	ADRB3	P13945	408 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	BRD2	P25440	801 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	OXCT1	P55809	520 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	POLE2	P56282	527 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	NUCB2	P80303	420 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	ZFP36L1	Q07352	338 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	CCDC15	Q0P6D6	951 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	KCNAB2	Q13303	367 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	ADAM9	Q13443	819 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	PHACTR4	Q8IZ21	702 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	BTN2A2	Q8WVV5	523 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	GLMN	Q92990	594 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	FAM149B1	Q96BN6	582 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	STRADB	Q9C0K7	418 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	SEPT10	Q9P0V9	454 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	VPS51	Q9UID3	782 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	PCDHA7	Q9UN72	937 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	MAPK8IP1	Q9UQF2	711 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	PLAA	Q9Y263	795 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	TBC1D30	Q9Y2I9	924 aa		11.27	□□□□□ -0.61
NUP62-222	ENST00000600935	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-222	ENST00000600935		A0A1W2PQ27	194 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935		A0A1W2PQ64	194 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935		A0A1W2PQC6	194 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	IGLON5	A6NGN9	336 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	TMX2-CTNND1	H3BSU7	103 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	FPGT	O14772	594 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	AP1G1	O43747	822 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	RPLP0	P05388	317 aa	Known RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	JMJD7	P0C870	316 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	GGCX	P38435	758 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ARSD	P51689	593 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	NEK3	P51956	506 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	AUH	Q13825	339 aa	Known RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	RABGAP1L	Q5R372	815 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	BORA	Q6PGQ7	559 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	TMEM270	Q6UE05	265 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	DPY19L3	Q6ZPD9	716 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	TMPRSS9	Q7Z410	1059 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	CEP57L1	Q8IYX8	460 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ARL10	Q8N8L6	244 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ATP6V0D2	Q8N8Y2	350 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ATP11C	Q8NB49	1132 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ZSCAN1	Q8NBB4	408 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	USP7	Q93009	1102 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	VOPP1	Q96AW1	172 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	FEM1C	Q96JP0	617 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	RPRD1A	Q96P16	312 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	CPEB1	Q9BZB8	566 aa	Known RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	TNKS2	Q9H2K2	1166 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	DYRK4	Q9NR20	520 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.26	□□□□□ -0.61	8e-6	■■□□□ 12.7
NUP62-222	ENST00000600935	PPP4R2	Q9NY27	417 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	IL36A	Q9UHA7	158 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	IPO11	Q9UI26	975 aa	Known RBP	11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	GGT7	Q9UJ14	662 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	TUBD1	Q9UJT1	453 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	VANGL2	Q9ULK5	521 aa		11.26	□□□□□ -0.61
NUP62-222	ENST00000600935	ZFHX3	Q15911	3703 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	AGRP	O00253	132 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	CNTN5	O94779	1100 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	RHOBTB3	O94955	611 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	ANXA6	P08133	673 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	ITGB7	P26010	798 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	IGFALS	P35858	605 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	ABL2	P42684	1182 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	GPD2	P43304	727 aa		11.25	□□□□□ -0.61
NUP62-222	ENST00000600935	YWHAE	P62258	255 aa	Known RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms