RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 A0A1W2PQF6 199 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 TNFRSF10AO00220 468 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 RNF103O00237 685 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 KCNN4O15554 427 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 PI15O43692 258 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 PHF2O75151 1096 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 AOC1P19801 751 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 CR2P20023 1033 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 STIP1P31948 543 aaKnown RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 WASP42768 502 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 MAGEA9P43362 315 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 RGRP47804 291 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 KCNJ1P48048 391 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 FNTAP49354 379 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 CLCN5P51795 746 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 GDF10P55107 478 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 CAMK2GQ13555 558 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 SNX1Q13596 522 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 EOGTQ5NDL2 527 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 C9orf64Q5T6V5 341 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 Q6ZVU0 165 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 BMP8AQ7Z5Y6 402 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 TSEN2Q8NCE0 465 aaKnown RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 OR2AP1Q8NGE2 309 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 TEKT5Q96M29 485 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 CINPQ9BW66 212 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 MFSD1Q9H3U5 465 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 MTG2Q9H4K7 406 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 EPHX3Q9H6B9 360 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 SLC8A2Q9UPR5 921 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 MIA3Q5JRA6 1907 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 TRIOO75962 3097 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CCDC188H7C350 402 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 STK25O00506 426 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ATG13O75143 517 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 SIN3BO75182 1162 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 GCATO75600 419 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 EPHX1P07099 455 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 DCNP07585 359 aaKnown RBP12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CHRNA3P32297 505 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CD68P34810 354 aaPredicted RBP12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CSNK1DP48730 415 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 NRLP54845 237 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 RHOAP61586 193 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF235Q14590 738 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ACCSLQ4AC99 568 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 SDE2Q6IQ49 451 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 DPY19L3Q6ZPD9 716 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 SYT13Q7L8C5 426 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 BBS5Q8N3I7 341 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ARRDC2Q8TBH0 407 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 SPATA13Q96N96 652 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 CEP41Q9BYV8 373 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 TM6SF2Q9BZW4 377 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 TNKS2Q9H2K2 1166 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 L2HGDHQ9H9P8 463 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 NT5MQ9NPB1 228 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 NEU2Q9Y3R4 380 aa12.84□□□□□ -0.35
CHMP2A-206ENST00000600118 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 OPHN1O60890 802 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 GJB3O75712 270 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 HOXB2P14652 356 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 COL9A1P20849 921 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 MAXP61244 160 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 NIPAL4Q0D2K0 466 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ELAVL3Q14576 367 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 IHHQ14623 411 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 CRY1Q16526 586 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 P3H1Q32P28 736 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 RALGPS1Q5JS13 557 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ANKRD20A2Q5SQ80 823 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ATXN7L2Q5T6C5 722 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ANKRD20A1Q5TYW2 823 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms