RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HEY1Q9Y5J3 304 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 RAD54BQ9Y620 910 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 STON1Q9Y6Q2 735 aa19.21■□□□□ 0.67
CCDC9-205ENST00000600117 TCRBV7S2A1N4TA0A589 114 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ZSCAN5CA6NGD5 496 aaPredicted RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 WASH3PC4AMC7 463 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 APOC4-APOC2K7ER74 178 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 K7ERQ8 282 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 SGK1O00141 431 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ATP9BO43861 1147 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 PEX11BO96011 259 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 APOC2P02655 101 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 PRKCHP24723 683 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 NTSR1P30989 418 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 HOXA6P31267 233 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 CXCR5P32302 372 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 GARSP41250 739 aaKnown RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 WASP42768 502 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 NR2C2P49116 596 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ETF1P62495 437 aaKnown RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 IL10RBQ08334 325 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 SLC20A2Q08357 652 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 E2F5Q15329 346 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 FNDC3BQ53EP0 1204 aaKnown RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 HEATR6Q6AI08 1181 aaKnown RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 RETSATQ6NUM9 610 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 LEKR1Q6ZMV7 388 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 TRMT11Q7Z4G4 463 aaKnown RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF354CQ86Y25 554 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 LRRC49Q8IUZ0 686 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 CHPFQ8IZ52 775 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 SH2D3CQ8N5H7 860 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ATPAF2Q8N5M1 289 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 C12orf50Q8NA57 414 aaPredicted RBP19.2■□□□□ 0.66
CCDC9-205ENST00000600117 FRS2Q8WU20 508 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 HAUS1Q96CS2 278 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 GABRG3Q99928 467 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 C2orf42Q9NWW7 574 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 MMP17Q9ULZ9 603 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 HPCAL4Q9UM19 191 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 SNX12Q9UMY4 172 aa19.2■□□□□ 0.66
CCDC9-205ENST00000600117 ITPR1Q14643 2758 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 CKAP5Q14008 2032 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 TTC34A8MYJ7 566 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SMAD6O43541 496 aaKnown RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 TJP3O95049 919 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF806P0C7X5 589 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 HLA-EP13747 358 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 MX2P20592 715 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SERPINH1P50454 418 aaKnown RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 ST8SIA6P61647 398 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SF3A2Q15428 464 aaKnown RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 PAPD7Q5XG87 772 aaKnown RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SERPINA13PQ6UXR4 307 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SLC13A5Q86YT5 568 aaPredicted RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF366Q8N895 744 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 HDAC11Q96DB2 347 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 LOXL4Q96JB6 756 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 PBKQ96KB5 322 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 TSGA13Q96PP4 275 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 OSBPL9Q96SU4 736 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 NAPGQ99747 312 aaPredicted RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 SP110Q9HB58 689 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 CD248Q9HCU0 757 aa19.19■□□□□ 0.66
CCDC9-205ENST00000600117 POLR3BQ9NW08 1133 aaPredicted RBP19.19■□□□□ 0.66
CCDC9-205ENST00000600117 CLCN6P51797 869 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 GEMIN4P57678 1058 aaKnown RBP19.18■□□□□ 0.66
CCDC9-205ENST00000600117 PPIDQ08752 370 aaKnown RBP19.18■□□□□ 0.66
CCDC9-205ENST00000600117 PDK1Q15118 436 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 NOMO1Q15155 1222 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 HNRNPA1L2Q32P51 320 aaKnown RBP19.18■□□□□ 0.66
CCDC9-205ENST00000600117 EOGTQ5NDL2 527 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 STPG1Q5TH74 334 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 WDR5BQ86VZ2 330 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 RASGEF1CQ8N431 466 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 ACTL9Q8TC94 416 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 COG1Q8WTW3 980 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 LRRN4Q8WUT4 740 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 P3H4Q92791 437 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 MTG2Q9H4K7 406 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 UBA2Q9UBT2 640 aaPredicted RBP19.18■□□□□ 0.66
CCDC9-205ENST00000600117 SHROOM3Q8TF72 1996 aa19.18■□□□□ 0.66
CCDC9-205ENST00000600117 A0A1W2PQF6 199 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CTAGE9A4FU28 777 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 AXIN1O15169 862 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CEP104O60308 925 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF821O75541 412 aaPredicted RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 HOXB2P14652 356 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CCNCP24863 283 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 OTUD4Q01804 1114 aaKnown RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CYTH1Q15438 398 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 SIX1Q15475 284 aaPredicted RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 DLG2Q15700 870 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 INO80DQ53TQ3 878 aaPredicted RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CCDC181Q5TID7 509 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 C22orf39Q6P5X5 142 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 SYT13Q7L8C5 426 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 ATP11CQ8NB49 1132 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CASKIN2Q8WXE0 1202 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms