RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 RCOR2Q8IZ40 523 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 PQLC3Q8N755 202 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 EXD1Q8NHP7 514 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 GRIN3AQ8TCU5 1115 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 FRS2Q8WU20 508 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 NSMCE1Q8WV22 266 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 PTPRN2Q92932 1015 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 FAF2Q96CS3 445 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 CEP44Q9C0F1 390 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 CYP8B1Q9UNU6 501 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 PCDHA3Q9Y5H8 950 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 NUP205Q92621 2012 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 PRAMEF11O60813 436 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 KRT10P13645 584 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 CETN2P41208 172 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 GBE1Q04446 702 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 POM121L1PQ3SYA9 428 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 TTC31Q49AM3 519 aaPredicted RBP20.46■□□□□ 0.87
IRF3-221ENST00000598808 FAM124AQ86V42 546 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 CREG2Q8IUH2 290 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 PCDH20Q8N6Y1 951 aaKnown RBP20.46■□□□□ 0.87
IRF3-221ENST00000598808 CINPQ9BW66 212 aaPredicted RBP20.46■□□□□ 0.87
IRF3-221ENST00000598808 CD248Q9HCU0 757 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 CHD5Q8TDI0 1954 aa20.46■□□□□ 0.87
IRF3-221ENST00000598808 MIF4GDA9UHW6 222 aaKnown RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 MAP3K13O43283 966 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 ZFXP17010 805 aaPredicted RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 MCM3P25205 808 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 CDKN2BP42772 138 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 VASPP50552 380 aaPredicted RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 RPS14P62263 151 aaKnown RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 TFDP2Q14188 446 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 PAFAH1B3Q15102 231 aaKnown RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 TFDP3Q5H9I0 405 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 TEX35Q5T0J7 233 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 CCDC70Q6NSX1 233 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 METTL3Q86U44 580 aaKnown RBP20.45■□□□□ 0.86
IRF3-221ENST00000598808 CCNYQ8ND76 341 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 LRRN4CLQ8ND94 238 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 OR6K2Q8NGY2 324 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 RUBCNQ92622 972 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 HAUS1Q96CS2 278 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 EXOC2Q96KP1 924 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 HEMGNQ9BXL5 484 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 ZDHHC6Q9H6R6 413 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 CD93Q9NPY3 652 aa20.45■□□□□ 0.86
IRF3-221ENST00000598808 CCDC163A0A0D9SF12 145 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 ZNF487B1APH4 448 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 NEBLO76041 1014 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 IL10RBQ08334 325 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 BYSLQ13895 437 aaKnown RBP20.44■□□□□ 0.86
IRF3-221ENST00000598808 ZNF235Q14590 738 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 CST6Q15828 149 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 LPAL2Q16609 132 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 ATXN7L2Q5T6C5 722 aaPredicted RBP20.44■□□□□ 0.86
IRF3-221ENST00000598808 NPNTQ6UXI9 565 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 VSIG1Q86XK7 387 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 FAM160A2Q8N612 972 aaPredicted RBP20.44■□□□□ 0.86
IRF3-221ENST00000598808 ZBTB44Q8NCP5 570 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 GAB3Q8WWW8 586 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 CASKIN2Q8WXE0 1202 aa20.44■□□□□ 0.86
IRF3-221ENST00000598808 RSPH9Q9H1X1 276 aaPredicted RBP20.44■□□□□ 0.86
IRF3-221ENST00000598808 C1QTNF3-AMACRE9PGA6 284 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 MID1O15344 667 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 CST8O60676 142 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 ZNF217O75362 1048 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 CD160O95971 181 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 IGSF6O95976 241 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 MX2P20592 715 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 SNRPD1P62314 119 aaKnown RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 ZNF211Q13398 564 aaPredicted RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 SIM2Q14190 667 aaPredicted RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 CARD16Q5EG05 197 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 SLC9A4Q6AI14 798 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 DPY19L3Q6ZPD9 716 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 PLD5Q8N7P1 536 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 CHST14Q8NCH0 376 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 OR2A12Q8NGT7 310 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 LRRN4Q8WUT4 740 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 GDAP1L1Q96MZ0 367 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 PDFQ9HBH1 243 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 IL36AQ9UHA7 158 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 RAB23Q9ULC3 237 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 hCG_1818297A0A087WSY0 165 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 KPNA3O00505 521 aaPredicted RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 KRIT1O00522 736 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 HRO43593 1189 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 ADH1BP00325 375 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 CHRNA3P32297 505 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 SLC8A1P32418 973 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 GARSP41250 739 aaKnown RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 CCNHP51946 323 aaPredicted RBP20.43■□□□□ 0.86
IRF3-221ENST00000598808 GALNT2Q10471 571 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 TMCO4Q5TGY1 634 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 BBS5Q8N3I7 341 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 PAF1Q8N7H5 531 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 FRMD1Q8N878 549 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 ALG3Q92685 438 aa20.43■□□□□ 0.86
IRF3-221ENST00000598808 NELL1Q92832 810 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms