RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 OVGP1Q12889 678 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 MANEALQ5VSG8 457 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 NEK5Q6P3R8 708 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 TRIM72Q6ZMU5 477 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 NLRP14Q86W24 1093 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 SLC25A45Q8N413 288 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 PCDH20Q8N6Y1 951 aaKnown RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 OR13H1Q8NG92 308 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 PPP1R16AQ96I34 528 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 OSBPL2Q9H1P3 480 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 ANO10Q9NW15 660 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 UCKL1Q9NWZ5 548 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 LIMA1Q9UHB6 759 aaKnown RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 GPSM3Q9Y4H4 160 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 LGALS16A8MUM7 142 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 PAK4O96013 591 aaPredicted RBP17.35■□□□□ 0.37
CCDC9-202ENST00000595659 ADRB3P13945 408 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 GPD1P21695 349 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 HNRNPA2B1P22626 353 aaKnown RBP17.35■□□□□ 0.37
CCDC9-202ENST00000595659 PTPN9P43378 593 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 NEK3P51956 506 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 MYL5Q02045 173 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 ZNF542PQ5EBM4 170 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 SCYL2Q6P3W7 929 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 FBXL19Q6PCT2 694 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 WDR59Q6PJI9 974 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 GCNT7Q6ZNI0 430 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 PARS2Q7L3T8 475 aaKnown RBP17.35■□□□□ 0.37
CCDC9-202ENST00000595659 STRADAQ7RTN6 431 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 TMPRSS12Q86WS5 348 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 PYROXD2Q8N2H3 581 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 TSC1Q92574 1164 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 CENPIQ92674 756 aaPredicted RBP17.35■□□□□ 0.37
CCDC9-202ENST00000595659 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 CEP44Q9C0F1 390 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 NEU3Q9UQ49 428 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 PCDHGA1Q9Y5H4 931 aa17.35■□□□□ 0.37
CCDC9-202ENST00000595659 RAD51BO15315 384 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 FFAR2O15552 330 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 SIGLEC6O43699 453 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 MYF5P13349 255 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 ITGB7P26010 798 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 L1CAMP32004 1257 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 NRG1Q02297 640 aaPredicted RBP17.34■□□□□ 0.37
CCDC9-202ENST00000595659 TARDBPQ13148 414 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC9-202ENST00000595659 FGL2Q14314 439 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 STX1AQ16623 288 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 COL28A1Q2UY09 1125 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 TMEM259Q4ZIN3 620 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 Q6ZSR6 202 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 ZNF354CQ86Y25 554 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
CCDC9-202ENST00000595659 TBC1D31Q96DN5 1066 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 GBP4Q96PP9 640 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 SLC17A9Q9BYT1 436 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 KLHL11Q9NVR0 708 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 TMEM248Q9NWD8 314 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 ITM2BQ9Y287 266 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 FADS3Q9Y5Q0 445 aa17.34■□□□□ 0.37
CCDC9-202ENST00000595659 KRIT1O00522 736 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 RAMP2O60895 175 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 CKMT2P17540 419 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 DGKAP23743 735 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 MAPKAPK2P49137 400 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 POLD3Q15054 466 aaPredicted RBP17.33■□□□□ 0.36
CCDC9-202ENST00000595659 LRRC73Q5JTD7 316 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 ATXN7L2Q5T6C5 722 aaPredicted RBP17.33■□□□□ 0.36
CCDC9-202ENST00000595659 HES3Q5TGS1 186 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 KDM7AQ6ZMT4 941 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 PTAR1Q7Z6K3 402 aaPredicted RBP17.33■□□□□ 0.36
CCDC9-202ENST00000595659 SLFN11Q7Z7L1 901 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 PHF13Q86YI8 300 aaPredicted RBP17.33■□□□□ 0.36
CCDC9-202ENST00000595659 SLC22A18ASQ8N1D0 253 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 FEM1CQ96JP0 617 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 BMFQ96LC9 184 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 AGPAT1Q99943 283 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 GGT7Q9UJ14 662 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 HPCAL4Q9UM19 191 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 PLXNB3Q9ULL4 1909 aa17.33■□□□□ 0.36
CCDC9-202ENST00000595659 POM121BA6NF01 834 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 IGLON5A6NGN9 336 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 SIGLEC16A6NMB1 481 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 C16orf96A6NNT2 1141 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 CCP110O43303 1012 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 BUB1O43683 1085 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 CALB1P05937 261 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 UGT2B4P06133 528 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 C1SP09871 688 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 ATP1A3P13637 1013 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 ETFBP38117 255 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 ABL2P42684 1182 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 RPL7AP62424 266 aaKnown RBP17.32■□□□□ 0.36
CCDC9-202ENST00000595659 RPS21P63220 83 aaKnown RBP17.32■□□□□ 0.36
CCDC9-202ENST00000595659 NCAPHQ15003 741 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 PROX2Q3B8N5 592 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 DNAJC24Q6P3W2 148 aa17.32■□□□□ 0.36
CCDC9-202ENST00000595659 MON1BQ7L1V2 547 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms