RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 DCAF6Q58WW2 860 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 PPP1R15BQ5SWA1 713 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 C11orf63Q6NUN7 778 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 BHLHA9Q7RTU4 235 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 TPCN2Q8NHX9 752 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 CLEC4CQ8WTT0 213 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 RXFP2Q8WXD0 754 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 SKA1Q96BD8 255 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 MYO19Q96H55 970 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 SEMA4CQ9C0C4 833 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 TMEM59LQ9UK28 342 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 CLCA2Q9UQC9 943 aa15.8■□□□□ 0.12
FOXA3-202ENST00000594297 A0A1W2PP55 124 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 TCRBV5S1A1TA0A578 114 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 CAPN8A6NHC0 703 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 TMEM110-MUSTN1A8MSY1 372 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 C10orf142B7Z368 130 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 MID1O15344 667 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SPOPO43791 374 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SIN3BO75182 1162 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 GABBR2O75899 941 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 PROSCO94903 275 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 MAN1A1P33908 653 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 ARRB1P49407 418 aaPredicted RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 NXPH1P58417 271 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 RPL7AP62424 266 aaKnown RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 INSM1Q01101 510 aaPredicted RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 ZNF569Q5MCW4 686 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 KANSL1Q7Z3B3 1105 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 DEFB106AQ8N104 65 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 NAF1Q96HR8 494 aaKnown RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SLC2A13Q96QE2 648 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 TRIM10Q9UDY6 481 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SCML1Q9UN30 329 aa15.79■□□□□ 0.12
FOXA3-202ENST00000594297 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.79■□□□□ 0.12
FOXA3-202ENST00000594297 KNTC1P50748 2209 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 LRRC72A6NJI9 287 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 C2CD4BA6NLJ0 364 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 USP27XA6NNY8 438 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 MSI1O43347 362 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 RNASEH2AO75792 299 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 ATP5BP06576 529 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 POLR2EP19388 210 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 PTPN9P43378 593 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 HARS2P49590 506 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 ILKQ13418 452 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 CST6Q15828 149 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 SLC25A52Q3SY17 297 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 ODF2Q5BJF6 829 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 KDM7AQ6ZMT4 941 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 PEX26Q7Z412 305 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 EMC1Q8N766 993 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 DCBLD1Q8N8Z6 715 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 ZNF248Q8NDW4 579 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 OR2T34Q8NGX1 318 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 JOSD2Q8TAC2 188 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 NDRG1Q92597 394 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 TMA16Q96EY4 203 aaKnown RBP15.78■□□□□ 0.12
FOXA3-202ENST00000594297 NEUROG2Q9H2A3 272 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 FAM204AQ9H8W3 233 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 CPNE5Q9HCH3 593 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 SUN2Q9UH99 717 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 STOML2Q9UJZ1 356 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 AMFRQ9UKV5 643 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 PCDHB1Q9Y5F3 818 aa15.78■□□□□ 0.12
FOXA3-202ENST00000594297 BUB1BO60566 1050 aaPredicted RBP15.77■□□□□ 0.12
FOXA3-202ENST00000594297 PALMO75781 387 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 CKMT2P17540 419 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 SULT1E1P49888 294 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 PCBP4P57723 403 aaKnown RBP15.77■□□□□ 0.12
FOXA3-202ENST00000594297 TMPRSS3P57727 454 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 PPP2CBP62714 309 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 PPP2CAP67775 309 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 RHDQ02161 417 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 TAF5Q15542 800 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 HNRNPA1L2Q32P51 320 aaKnown RBP15.77■□□□□ 0.12
FOXA3-202ENST00000594297 STRADAQ7RTN6 431 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 CACTIN-AS1Q8N1I8 211 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 C17orf53Q8N3J3 647 aaPredicted RBP15.77■□□□□ 0.12
FOXA3-202ENST00000594297 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 NIPA2Q8N8Q9 360 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 FAM181AQ8N9Y4 354 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 EDEM1Q92611 657 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 RNF34Q969K3 372 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 SERAC1Q96JX3 654 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 CLMPQ9H6B4 373 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 FZD4Q9ULV1 537 aa15.77■□□□□ 0.12
FOXA3-202ENST00000594297 HBS1LQ9Y450 684 aaKnown RBP15.77■□□□□ 0.12
FOXA3-202ENST00000594297 A0A0U1RQJ8 604 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 MIF4GDA9UHW6 222 aaKnown RBP15.76■□□□□ 0.11
FOXA3-202ENST00000594297 M0QYT0 321 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 TBL1XO60907 577 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 SDC3O75056 442 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 GJB6O95452 261 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 LATS1O95835 1130 aa15.76■□□□□ 0.11
FOXA3-202ENST00000594297 SLC2A3P11169 496 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms