RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 C2CD6Q53TS8 623 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 HSP90AA4PQ58FG1 418 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 MIIPQ5JXC2 388 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 KLHDC7AQ5VTJ3 777 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 Q6ZSR6 202 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 FEM1CQ96JP0 617 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 DUSP23Q9BVJ7 150 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 SLC17A9Q9BYT1 436 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 DACH1Q9UI36 760 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 HS3ST3A1Q9Y663 406 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 ZNF821O75541 412 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 L1CAMP32004 1257 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 CCNHP51946 323 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 HNRNPKP61978 463 aaKnown RBP eCLIP23.09■■□□□ 1.291e-17■■■■■ 94.9
SSBP4-203ENST00000593641 ARF5P84085 180 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 GNA12Q03113 381 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 TBC1D25Q3MII6 688 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 CARD16Q5EG05 197 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 KYAT3Q6YP21 454 aaKnown RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 ZSCAN30Q86W11 494 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 FCRL3Q96P31 734 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 PRORYQ9H606 182 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 PPARGC1AQ9UBK2 798 aaKnown RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 ZNF212Q9UDV6 495 aa23.09■■□□□ 1.29
SSBP4-203ENST00000593641 FCF1Q9Y324 198 aaKnown RBP23.09■■□□□ 1.29
SSBP4-203ENST00000593641 H3BM21 787 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 ZMPSTE24O75844 475 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 UCHL3P15374 230 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 ETFBP38117 255 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 DUSP3P51452 185 aaPredicted RBP23.08■■□□□ 1.29
SSBP4-203ENST00000593641 ZNF542PQ5EBM4 170 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 NAA35Q5VZE5 725 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 TRNP1Q6NT89 227 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 DPY19L2P1Q6NXN4 242 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 ARCQ7LC44 396 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 BNIPLQ7Z465 357 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 NOP9Q86U38 636 aaKnown RBP23.08■■□□□ 1.29
SSBP4-203ENST00000593641 CPA5Q8WXQ8 436 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 APOLD1Q96LR9 279 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 DEPDC7Q96QD5 511 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 ZDHHC6Q9H6R6 413 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 USP29Q9HBJ7 922 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 METTL5Q9NRN9 209 aaKnown RBP23.08■■□□□ 1.29
SSBP4-203ENST00000593641 TMEM59LQ9UK28 342 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 FADS3Q9Y5Q0 445 aa23.08■■□□□ 1.29
SSBP4-203ENST00000593641 SCAMP1O15126 338 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 AP1G1O43747 822 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 PAK4O96013 591 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 GP1BAP07359 652 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 GIMD1P0DJR0 217 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 ERCC5P28715 1186 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 RABIFP47224 123 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 NOMO3P69849 1222 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 ATP11AP98196 1134 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 DPCR1Q3MIW9 517 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 ARL13BQ3SXY8 428 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 PARS2Q7L3T8 475 aaKnown RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 PARGQ86W56 976 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 RYBPQ8N488 228 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 FAM181AQ8N9Y4 354 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 BMFQ96LC9 184 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 NAA15Q9BXJ9 866 aaKnown RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 TM6SF2Q9BZW4 377 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 ABCG4Q9H172 646 aa23.07■■□□□ 1.28
SSBP4-203ENST00000593641 HECAQ9UBI9 543 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 IPO11Q9UI26 975 aaKnown RBP23.07■■□□□ 1.28
SSBP4-203ENST00000593641 POM121BA6NF01 834 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 F8VZ95 297 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 NEMP1O14524 444 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 FPGTO14772 594 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 OPA1O60313 960 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 MMEP08473 750 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 GEMIN4P57678 1058 aaKnown RBP23.06■■□□□ 1.28
SSBP4-203ENST00000593641 CCDC173Q0VFZ6 552 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 SGCGQ13326 291 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 CDO1Q16878 200 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 EPS8L1Q8TE68 723 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 LGMNQ99538 433 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 STK33Q9BYT3 514 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 GPR27Q9NS67 375 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 PCDHB1Q9Y5F3 818 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 RAI2Q9Y5P3 530 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 RP1P56715 2156 aa23.06■■□□□ 1.28
SSBP4-203ENST00000593641 HELZ2Q9BYK8 2649 aaKnown RBP23.05■■□□□ 1.28
SSBP4-203ENST00000593641 SPTY2D1-AS1A0A0U1RR47 76 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 CXorf51AA0A1B0GTR3 108 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 K7ESM1 405 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 NEBLO76041 1014 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 FGL2Q14314 439 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 FZD2Q14332 565 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 POLD3Q15054 466 aaPredicted RBP23.05■■□□□ 1.28
SSBP4-203ENST00000593641 ARTNQ5T4W7 220 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 CDCP2Q5VXM1 449 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 RWDD4Q6NW29 188 aaKnown RBP23.05■■□□□ 1.28
SSBP4-203ENST00000593641 ZNF677Q86XU0 584 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 EMC1Q8N766 993 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 ZNF548Q8NEK5 533 aaPredicted RBP23.05■■□□□ 1.28
SSBP4-203ENST00000593641 SLC39A7Q92504 469 aa23.05■■□□□ 1.28
SSBP4-203ENST00000593641 RAB7BQ96AH8 199 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms