RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KYAT3Q6YP21 454 aaKnown RBP16.68■□□□□ 0.26
LIG1-205ENST00000593425 PARS2Q7L3T8 475 aaKnown RBP16.68■□□□□ 0.26
LIG1-205ENST00000593425 GPR155Q7Z3F1 870 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 FAM131BQ86XD5 332 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 IFT43Q96FT9 208 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 CFAP57Q96MR6 1250 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 SLC17A9Q9BYT1 436 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 ATP13A1Q9HD20 1204 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 FCF1Q9Y324 198 aaKnown RBP16.68■□□□□ 0.26
LIG1-205ENST00000593425 PAXBP1Q9Y5B6 917 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 FADS3Q9Y5Q0 445 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 HS3ST3A1Q9Y663 406 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 CHD5Q8TDI0 1954 aa16.68■□□□□ 0.26
LIG1-205ENST00000593425 PTPRQQ9UMZ3 2332 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 GOLGA8SH3BPF8 625 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 SCAMP1O15126 338 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 CD160O95971 181 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 ALPPL2P10696 532 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 L1CAMP32004 1257 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 DNA2P51530 1060 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 BPIFB4P59827 614 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 RPS21P63220 83 aaKnown RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 CXADRP78310 365 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 GABREP78334 506 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 DRAP1Q14919 205 aaPredicted RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 RAB6CQ53S08 254 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 CARD16Q5EG05 197 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 TPRG1LQ5T0D9 272 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 KIAA1161Q6NSJ0 714 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 PCSK4Q6UW60 755 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 ZNF783Q6ZMS7 281 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 PCDH20Q8N6Y1 951 aaKnown RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 FAM181AQ8N9Y4 354 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 ZNF548Q8NEK5 533 aaPredicted RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 NAF1Q96HR8 494 aaKnown RBP16.67■□□□□ 0.26
LIG1-205ENST00000593425 HAPLN3Q96S86 360 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 LGMNQ99538 433 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 HEPHQ9BQS7 1158 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 ZYG11BQ9C0D3 744 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 CEP44Q9C0F1 390 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 RAB6CQ9H0N0 254 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 KLF15Q9UIH9 416 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 TMEM59LQ9UK28 342 aa16.67■□□□□ 0.26
LIG1-205ENST00000593425 ASXL3Q9C0F0 2248 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 TEX51A0A1B0GUA7 166 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 USP12O75317 370 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 CSO75390 466 aaKnown RBP16.66■□□□□ 0.26
LIG1-205ENST00000593425 GP1BAP07359 652 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 GKP32189 559 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 ABL2P42684 1182 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 HNRNPKP61978 463 aaKnown RBP eCLIP16.66■□□□□ 0.26
LIG1-205ENST00000593425 GNA12Q03113 381 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 VWA3BQ502W6 1294 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 HSP90AA4PQ58FG1 418 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 NOP9Q86U38 636 aaKnown RBP16.66■□□□□ 0.26
LIG1-205ENST00000593425 ZNF248Q8NDW4 579 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 FAM174AQ8TBP5 190 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 IFI44Q8TCB0 444 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 DEPDC7Q96QD5 511 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
LIG1-205ENST00000593425 TM6SF2Q9BZW4 377 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 OSBPL2Q9H1P3 480 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 ZDHHC6Q9H6R6 413 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 NDFIP2Q9NV92 336 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 GGT7Q9UJ14 662 aa16.66■□□□□ 0.26
LIG1-205ENST00000593425 SPTY2D1-AS1A0A0U1RR47 76 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 NEMP2A6NFY4 417 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 SPINT1O43278 529 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 AP1G1O43747 822 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 CSF2P04141 144 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 NME1P15531 152 aaKnown RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 ACVRL1P37023 503 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 PCBP4P57723 403 aaKnown RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 PDE1CQ14123 709 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 ACBD5Q5T8D3 534 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 PARGQ86W56 976 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 DCP2Q8IU60 420 aaKnown RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 EMC1Q8N766 993 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 OR6K2Q8NGY2 324 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 VOPP1Q96AW1 172 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 HIC2Q96JB3 615 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 FEM1CQ96JP0 617 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 ZNF578Q96N58 590 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 DUSP23Q9BVJ7 150 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 METTL5Q9NRN9 209 aaKnown RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 HECAQ9UBI9 543 aaPredicted RBP16.65■□□□□ 0.26
LIG1-205ENST00000593425 ITM2BQ9Y287 266 aa16.65■□□□□ 0.26
LIG1-205ENST00000593425 IGLON5A6NGN9 336 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 DXOO77932 396 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms