RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CCNHP51946 323 aaPredicted RBP13.53□□□□□ -0.24
APOC1-209ENST00000592885 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
APOC1-209ENST00000592885 RPS21P63220 83 aaKnown RBP13.53□□□□□ -0.24
APOC1-209ENST00000592885 PTP4A2Q12974 167 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 BNIP3Q12983 259 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 SYCP1Q15431 976 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 STX1AQ16623 288 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 CDO1Q16878 200 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 C15orf59Q2T9L4 293 aaPredicted RBP13.53□□□□□ -0.24
APOC1-209ENST00000592885 HS1BP3Q53T59 392 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
APOC1-209ENST00000592885 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 NEK11Q8NG66 645 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 FANCLQ9NW38 375 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 NEU3Q9UQ49 428 aa13.53□□□□□ -0.24
APOC1-209ENST00000592885 ACACAQ13085 2346 aa13.52□□□□□ -0.24
APOC1-209ENST00000592885 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 RIOK3O14730 519 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 SLC31A1O15431 190 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 RAMP2O60895 175 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 LRIG2O94898 1065 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 PRLRP16471 622 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 GPD1P21695 349 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 AIF1P55008 147 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 HDAC4P56524 1084 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 DNAJC3Q13217 504 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 ZNF211Q13398 564 aaPredicted RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 POLD3Q15054 466 aaPredicted RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 RWDD4Q6NW29 188 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 GCNT7Q6ZNI0 430 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 JOSD2Q8TAC2 188 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 FAM172AQ8WUF8 416 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 CASKIN2Q8WXE0 1202 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 ASB12Q8WXK4 309 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 RFFLQ8WZ73 363 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 ARHGEF2Q92974 986 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 ARHGEF26Q96DR7 871 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 OSBPL1AQ9BXW6 950 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 GPR27Q9NS67 375 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 ZFR2Q9UPR6 939 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 FCF1Q9Y324 198 aaKnown RBP13.52□□□□□ -0.25
APOC1-209ENST00000592885 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 HS3ST3A1Q9Y663 406 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 APC2O95996 2303 aa13.52□□□□□ -0.25
APOC1-209ENST00000592885 FREM2Q5SZK8 3169 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 DMXL2Q8TDJ6 3036 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 ARID1BQ8NFD5 2236 aaPredicted RBP13.51□□□□□ -0.25
APOC1-209ENST00000592885 FAM170AA1A519 330 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 LRRC10BA6NIK2 292 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 TSPAN6O43657 245 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 CD160O95971 181 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 PLEKP08567 350 aaPredicted RBP13.51□□□□□ -0.25
APOC1-209ENST00000592885 CCDC172P0C7W6 258 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 ALPPL2P10696 532 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 JUPP14923 745 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 DESP17661 470 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 SNRPD1P62314 119 aaKnown RBP13.51□□□□□ -0.25
APOC1-209ENST00000592885 CYP4F3Q08477 520 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 EFHC2Q5JST6 749 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 HES3Q5TGS1 186 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 MON1BQ7L1V2 547 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 PARS2Q7L3T8 475 aaKnown RBP13.51□□□□□ -0.25
APOC1-209ENST00000592885 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 OR13H1Q8NG92 308 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 OR2AP1Q8NGE2 309 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 OR4C6Q8NH72 309 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
APOC1-209ENST00000592885 PCDHB18PQ96TA0 734 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 NRSN2Q9GZP1 204 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 ZDHHC6Q9H6R6 413 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 USP29Q9HBJ7 922 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 EVA1BQ9NVM1 165 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 CA5BQ9Y2D0 317 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 ZFYVE26Q68DK2 2539 aa13.51□□□□□ -0.25
APOC1-209ENST00000592885 GOLGA4Q13439 2230 aaKnown RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 A0A087WV48 116 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 FAM72CH0Y354 149 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms