RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 HCAR3P49019 387 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 AIF1P55008 147 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 USP10Q14694 798 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 INTS6LQ5JSJ4 861 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 IL23RQ5VWK5 629 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 KCTD4Q8WVF5 259 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 LZICQ8WZA0 190 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SCYL1Q96KG9 808 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 NPAS2Q99743 824 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 KIFC1Q9BW19 673 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 LRRC4Q9HBW1 653 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 MRPL40Q9NQ50 206 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 DDX18Q9NVP1 670 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SUCOQ9UBS9 1254 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 GMEB1Q9Y692 573 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SBF1O95248 1867 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FAM72CH0Y354 149 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 AP3B1O00203 1094 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PHGDHO43175 533 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 HNRNPRO43390 633 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 NPHS1O60500 1241 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 DNAJB2P25686 324 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 TKTP29401 623 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 HOXA11P31270 313 aaPredicted RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 POLD2P49005 469 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 TRIM25Q14258 630 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 PTK2BQ14289 1009 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FBXO47Q5MNV8 452 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FAM72AQ5TYM5 149 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SYPL2Q5VXT5 272 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 ITPRIPL1Q6GPH6 555 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FAM72DQ6L9T8 149 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 LRRC8EQ6NSJ5 796 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 LIMS2Q7Z4I7 341 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FAM72BQ86X60 149 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 NTAN1Q96AB6 310 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 GPR78Q96P69 363 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 CAMKK2Q96RR4 588 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 VAT1Q99536 393 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 DUSP16Q9BY84 665 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SNX25Q9H3E2 840 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PIGVQ9NUD9 493 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 GJD2Q9UKL4 321 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 RNF11Q9Y3C5 154 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PCDHGA7Q9Y5G6 932 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SYNJ2BP-COX16A0A087WUM0 186 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 C7orf72A4D263 438 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 TRPC5OSA6NMA1 111 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 H3BSA7 217 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FAM200BP0CF97 657 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 CDH2P19022 906 aaPredicted RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 GLRBP48167 497 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SCAPQ12770 1279 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 LAMC2Q13753 1193 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 KCTD2Q14681 263 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 ZNF280DQ6N043 979 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PAOXQ6QHF9 649 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 GADL1Q6ZQY3 521 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PELI3Q8N2H9 469 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 CEP70Q8NHQ1 597 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 HDAC11Q96DB2 347 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 TMA16Q96EY4 203 aaKnown RBP15.06■□□□□ 0
SMARCA4-219ENST00000592604 MARK4Q96L34 752 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 APBA2Q99767 749 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 HAUS8Q9BT25 410 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 COX16Q9P0S2 106 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 AK5Q9Y6K8 562 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 NUP205Q92621 2012 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 C9IYK1 514 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 SDHDO14521 159 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 TRMUO75648 421 aaKnown RBP15.05■□□□□ 0
SMARCA4-219ENST00000592604 ZNF23P17027 643 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 TPH1P17752 444 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 GABRB3P28472 473 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 PCSK6P29122 969 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 PSME3P61289 254 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 CDH17Q12864 832 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 NME3Q13232 169 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 MYBPC3Q14896 1274 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 AMIGO2Q86SJ2 522 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 TRPM4Q8TD43 1214 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 ATP6V1E2Q96A05 226 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 EME1Q96AY2 570 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 DUS3LQ96G46 650 aaKnown RBP15.05■□□□□ 0
SMARCA4-219ENST00000592604 HNRNPABQ99729 332 aaKnown RBP15.05■□□□□ 0
SMARCA4-219ENST00000592604 OSBPL11Q9BXB4 747 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 MRGBPQ9NV56 204 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 SARDHQ9UL12 918 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 ACOT9Q9Y305 439 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 AP4S1Q9Y587 144 aa15.05■□□□□ 0
SMARCA4-219ENST00000592604 PDCD11Q14690 1871 aaKnown RBP15.05■□□□□ -0
SMARCA4-219ENST00000592604 FNDC1Q4ZHG4 1894 aaPredicted RBP15.05■□□□□ -0
SMARCA4-219ENST00000592604 GOLGA8TH3BQL2 631 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 SPTLC1O15269 473 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 AHSGP02765 367 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 NFKB1P19838 968 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 ATXN3P54252 364 aaPredicted RBP15.05■□□□□ -0
SMARCA4-219ENST00000592604 RHDQ02161 417 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms