RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MYL5Q02045 173 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 DEUP1Q05D60 604 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ZNF284Q2VY69 593 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 SETMARQ53H47 684 aaPredicted RBP10.64□□□□□ -0.71
VPS4B-207ENST00000591519 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 LCE2CQ5TA81 110 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 FBXL19Q6PCT2 694 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 C19orf48Q6RUI8 117 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 PDZD3Q86UT5 571 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ERICH1Q86X53 443 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 XYLT1Q86Y38 959 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ATP11CQ8NB49 1132 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 RFFLQ8WZ73 363 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 KLHDC7BQ96G42 594 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 CCDC114Q96M63 670 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 HDAC8Q9BY41 377 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 STK33Q9BYT3 514 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 NRSN2Q9GZP1 204 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 MUC3BQ9H195 1237 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 PLCB1Q9NQ66 1216 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 VPS51Q9UID3 782 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 DOCK4Q8N1I0 1966 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 NBEAQ8NFP9 2946 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 K7ERQ8 282 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 SMAD6O43541 496 aaKnown RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ZNF821O75541 412 aaPredicted RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 PRNPP04156 253 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 UCHL3P15374 230 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 PTMSP20962 102 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 CDK11BP21127 795 aaKnown RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ACP1P24666 158 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 OR1E1P30953 314 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 HNF1BP35680 557 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 FLT3P36888 993 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 SULT1E1P49888 294 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 DNAJC3Q13217 504 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 COL9A2Q14055 689 aaPredicted RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 RTP5Q14D33 572 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 KRT31Q15323 416 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 TRNP1Q6NT89 227 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 RETSATQ6NUM9 610 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ERN2Q76MJ5 926 aaKnown RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 HORMAD1Q86X24 394 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 SLC25A45Q8N413 288 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 HNRNPLLQ8WVV9 542 aaKnown RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 ARRDC3Q96B67 414 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 IFT43Q96FT9 208 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 TBCBQ99426 244 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 CEP44Q9C0F1 390 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 PDCL3Q9H2J4 239 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 KLHL11Q9NVR0 708 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 MPP6Q9NZW5 540 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 PPARGC1AQ9UBK2 798 aaKnown RBP10.63□□□□□ -0.71
VPS4B-207ENST00000591519 SNX10Q9Y5X0 201 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 FHOD1Q9Y613 1164 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 CELSR3Q9NYQ7 3312 aa10.63□□□□□ -0.71
VPS4B-207ENST00000591519 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 RNF103O00237 685 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 SLC31A1O15431 190 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 TPM2P07951 284 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 DGKAP23743 735 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 RRM1P23921 792 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 E2F1Q01094 437 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 NRG1Q02297 640 aaPredicted RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 TARDBPQ13148 414 aaKnown RBP eCLIP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 POM121L1PQ3SYA9 428 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 SOWAHCQ53LP3 525 aaPredicted RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 CCDC157Q569K6 752 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 FAM102AQ5T9C2 384 aaPredicted RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 CDKAL1Q5VV42 579 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 DPY19L3Q6ZPD9 716 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 ABI3BPQ7Z7G0 1075 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 NOP9Q86U38 636 aaKnown RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 DCP2Q8IU60 420 aaKnown RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 CHST14Q8NCH0 376 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 ZYG11BQ9C0D3 744 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 NAT10Q9H0A0 1025 aaKnown RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 TMPRSS4Q9NRS4 437 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 IL36AQ9UHA7 158 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 ZFR2Q9UPR6 939 aaKnown RBP10.62□□□□□ -0.71
VPS4B-207ENST00000591519 HS3ST3A1Q9Y663 406 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 WASF2Q9Y6W5 498 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 ASXL3Q9C0F0 2248 aa10.62□□□□□ -0.71
VPS4B-207ENST00000591519 MYLKQ15746 1914 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 FAM170AA1A519 330 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 KPNA3O00505 521 aaPredicted RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 TRIM38O00635 465 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 BNIP3LO60238 219 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 SRGAP2O75044 1071 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 CD160O95971 181 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 THEGLP0DJG4 465 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms