RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 IFT80Q9P2H3 777 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 SLCO3A1Q9UIG8 710 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ZDHHC2Q9UIJ5 367 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 DSEQ9UL01 958 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 PNMA8BQ9ULN7 279 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 COPG1Q9Y678 874 aaKnown RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TRIM38O00635 465 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 CD19P15391 556 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 OCA2Q04671 838 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 TRIM25Q14258 630 aaKnown RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 UGCGQ16739 394 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 GET4Q7L5D6 327 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 SLCO6A1Q86UG4 719 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 AKAP14Q86UN6 197 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 C11orf74Q86VG3 221 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 BPHLQ86WA6 291 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ZCCHC7Q8N3Z6 543 aaKnown RBP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 BBS2Q9BXC9 721 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.39■□□□□ 0.05
CIRBP-228ENST00000590347 ZHX2Q9Y6X8 837 aa15.39■□□□□ 0.05
CIRBP-228ENST00000590347 PHGDHO43175 533 aaKnown RBP15.38■□□□□ 0.05
CIRBP-228ENST00000590347 FYNP06241 537 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 ATP6V1B2P21281 511 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 PRKCHP24723 683 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 NAGLUP54802 743 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CCNA1P78396 465 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 AP3B2Q13367 1082 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 SMU1Q2TAY7 513 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CEP78Q5JTW2 689 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 RSBN1Q5VWQ0 802 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-228ENST00000590347 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 ANKRD13BQ86YJ7 626 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 BSNDQ8WZ55 320 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 ZBTB45Q96K62 511 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-228ENST00000590347 OLFM1Q99784 485 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CCDC90BQ9GZT6 254 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CHRAC1Q9NRG0 131 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 ANKMY1Q9P2S6 941 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 PCDHGC3Q9UN70 934 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CDK5RAP2Q96SN8 1893 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 GLRA3O75311 464 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CDH1P12830 882 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 ACO1P21399 889 aaKnown RBP15.38■□□□□ 0.05
CIRBP-228ENST00000590347 PRKACBP22694 351 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 AVPR1AP37288 418 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 DPYSQ14117 519 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 NATD1Q8N6N6 113 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 DLG3Q92796 817 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 NEK6Q9HC98 313 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 TCAF1Q9Y4C2 921 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 MAGED1Q9Y5V3 778 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
CIRBP-228ENST00000590347 COL11A2P13942 1736 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SPNP16150 400 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 MIPP30301 263 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SERPINB1P30740 379 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 KRT76Q01546 638 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SLC25A11Q02978 314 aaKnown RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 CUL2Q13617 745 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 ARL13AQ5H913 290 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TMTC4Q5T4D3 741 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 UGT3A1Q6NUS8 523 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 FAM20CQ8IXL6 584 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 CDK5RAP1Q96SZ6 601 aaKnown RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SH3GL1Q99961 368 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 OMDQ99983 421 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 HOXD1Q9GZZ0 328 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TEX28O15482 410 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 OXTRP30559 389 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SLC7A2P52569 658 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 RHDQ02161 417 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 GCNT1Q02742 428 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TRPC3Q13507 836 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 C15orf59Q2T9L4 293 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 LRIT3Q3SXY7 679 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 XKR9Q5GH70 373 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 CRTC3Q6UUV7 619 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TMEM179Q6ZVK1 233 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 RP9Q8TA86 221 aaKnown RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SDCCAG3Q96C92 435 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 GIMAP4Q9NUV9 329 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 MTRRQ9UBK8 725 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 ATP6AP2A0A1C7CYW4 349 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 PTGES3LE9PB15 166 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SNPHO15079 494 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TMCC2O75069 709 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 ATP6AP2O75787 350 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 RSL1D1O76021 490 aaKnown RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 HMGCRP04035 888 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 KRT3P12035 628 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 RARRES1P49788 294 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 AGKQ53H12 422 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms