RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 USP12O75317 370 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 SOAT2O75908 522 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 PIAS1O75925 651 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 APOA4P06727 396 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 BPGMP07738 259 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ERVK-10P10266 1014 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 HMGA1P17096 107 aaKnown RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 HLA-DPA1P20036 260 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 GRK2P25098 689 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 SCTRP47872 440 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 SERPINH1P50454 418 aaKnown RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 WNT3AP56704 352 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 CRADDP78560 199 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ZNF177Q13360 481 aaPredicted RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 GALNTL6Q49A17 601 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ALFQ53S48 1182 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ALG1LQ6GMV1 187 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 DENND5AQ6IQ26 1287 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 KDELC1Q6UW63 502 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 FAM47EQ6ZV65 393 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 OTOAQ7RTW8 1153 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ZNF354CQ86Y25 554 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 LGI2Q8N0V4 545 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 IPMKQ8NFU5 416 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 TADA1Q96BN2 335 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 MFSD3Q96ES6 412 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 TSNARE1Q96NA8 513 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 LRRC37BQ96QE4 947 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 FICDQ9BVA6 458 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 SLC13A1Q9BZW2 595 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 RHOJQ9H4E5 214 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 CCSER2Q9H7U1 834 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 UGT1A7Q9HAW7 530 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 UGT1A10Q9HAW8 530 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 UGT1A8Q9HAW9 530 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ATP13A1Q9HD20 1204 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 CHRAC1Q9NRG0 131 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 STOML2Q9UJZ1 356 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 ZNF510Q9Y2H8 683 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 CENPFP49454 3210 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 A0A1B0GVM2 712 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 LOC285095A0A1B0GVY8 99 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 TYW5A2RUC4 315 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 TCAF2A6NFQ2 919 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 TPP1O14773 563 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 ADAM12O43184 909 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 COCHO43405 550 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 KDELR3O43731 214 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 CNTN5O94779 1100 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 MT-CYBP00156 380 aaPredicted RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 C1RP00736 705 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 HMBSP08397 361 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 RAG1P15918 1043 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 HOXB8P17481 243 aaPredicted RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 RASSF2P50749 326 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 GNA12Q03113 381 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 ITKQ08881 620 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 BNIP1Q12981 228 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 THOC5Q13769 683 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 BMPR2Q13873 1038 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 ZNF235Q14590 738 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 HSP90AA5PQ58FG0 334 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 RALGPS1Q5JS13 557 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 ADGRF1Q5T601 910 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 NADSYN1Q6IA69 706 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 CGB2Q6NT52 195 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 NECAB2Q7Z6G3 386 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 CRLF3Q8IUI8 442 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 ARMC2Q8NEN0 867 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 SPATA22Q8NHS9 363 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 RDH11Q8TC12 318 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 PSMG2Q969U7 264 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 PABPC5Q96DU9 382 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 FEM1CQ96JP0 617 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 MCMBPQ9BTE3 642 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 VN1R3Q9BXE9 311 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 STN1Q9H668 368 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 NT5MQ9NPB1 228 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 SAR1AQ9NR31 198 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 IARS2Q9NSE4 1012 aaKnown RBP10.53□□□□□ -0.72
VPS25-203ENST00000589520 TREX1Q9NSU2 369 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 TXLNGQ9NUQ3 528 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 PCMTD2Q9NV79 361 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 SEPT3Q9UH03 358 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 TLK1Q9UKI8 766 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 SLC12A4Q9UP95 1085 aa10.53□□□□□ -0.72
VPS25-203ENST00000589520 VWA8A3KMH1 1905 aa10.52□□□□□ -0.72
VPS25-203ENST00000589520 CXorf51AA0A1B0GTR3 108 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms