RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CNPY4Q8N129 248 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 DNAAF3Q8N9W5 541 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 OR52K1Q8NGK4 314 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 IMP4Q96G21 291 aaKnown RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 CDCA3Q99618 268 aaPredicted RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 TBL1YQ9BQ87 522 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 DHRS4Q9BTZ2 278 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ACE2Q9BYF1 805 aaPredicted RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 POLR1EQ9GZS1 481 aaKnown RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 IL22Q9GZX6 179 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 CNOT10Q9H9A5 744 aaKnown RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 NT5MQ9NPB1 228 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ACTL7BQ9Y614 415 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 MUC6Q6W4X9 2439 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 A0A0D9SEW6 157 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 MAGEB16A2A368 324 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 POC1B-GALNT4F8VUJ3 575 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 H0Y626 953 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 TCF3P15923 654 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 GCAP28676 217 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 GYS2P54840 703 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 FRG1Q14331 258 aaKnown RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF235Q14590 738 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 MPPE1Q53F39 396 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 RNF43Q68DV7 783 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 CASC4Q6P4E1 433 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 MPP5Q8N3R9 675 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 TDRD5Q8NAT2 981 aaKnown RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 OR7D4Q8NG98 312 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 OR52K2Q8NGK3 314 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 SPATA22Q8NHS9 363 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF707Q96C28 371 aaPredicted RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 TCEAL4Q96EI5 215 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 PAFAH2Q99487 392 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 FSD1LQ9BXM9 530 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 TLE6Q9H808 572 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 ATP13A1Q9HD20 1204 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 SYBUQ9NX95 663 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 PSD3Q9NYI0 1048 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 SENP1Q9P0U3 644 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 UBA2Q9UBT2 640 aaPredicted RBP12.26□□□□□ -0.45
CCBE1-203ENST00000589116 CTNNAL1Q9UBT7 734 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
CCBE1-203ENST00000589116 MIA3Q5JRA6 1907 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 DOCK6Q96HP0 2047 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 CCDC195A0A1B0GUA6 201 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 PER2O15055 1255 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 USP12O75317 370 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 MT-CYBP00156 380 aaPredicted RBP12.25□□□□□ -0.45
CCBE1-203ENST00000589116 POLBP06746 335 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 HPDP32754 393 aaPredicted RBP12.25□□□□□ -0.45
CCBE1-203ENST00000589116 ADRA1AP35348 466 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 MSH2P43246 934 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 NAB1Q13506 487 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 CDH18Q13634 790 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 SLC5A9Q2M3M2 681 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 KBTBD12Q3ZCT8 623 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 SPANXN3Q5MJ09 141 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 ADGRD2Q7Z7M1 963 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 BBS7Q8IWZ6 715 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 IPMKQ8NFU5 416 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 SH3RF2Q8TEC5 729 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 TADA1Q96BN2 335 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 MUC3BQ9H195 1237 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 SFXN1Q9H9B4 322 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 TDP1Q9NUW8 608 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 UBP1Q9NZI7 540 aa12.25□□□□□ -0.45
CCBE1-203ENST00000589116 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
CCBE1-203ENST00000589116 FAM237BA0A1B0GVD1 139 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 ALDH1A2O94788 518 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 C1QAP02745 245 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 CYBBP04839 570 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 USP4Q13107 963 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 CRYMQ14894 314 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 TMED2Q15363 201 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 SKIDA1Q1XH10 827 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 KDELC1Q6UW63 502 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 GRASPQ7Z6J2 395 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 PRPF39Q86UA1 669 aaKnown RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 TMEM135Q86UB9 458 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 LRRC6Q86X45 466 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 MFN1Q8IWA4 741 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 KIAA1958Q8N8K9 716 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 DCAF4L2Q8NA75 395 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 SLC44A1Q8WWI5 657 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-203ENST00000589116 PPP2R3CQ969Q6 453 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 MRGPRX2Q96LB1 330 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms