RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
SMAD4-206ENST00000588860 PRKAG2Q9UGJ0 569 aa8.91□□□□□ -0.98
SMAD4-206ENST00000588860 MAFFQ9ULX9 164 aa8.91□□□□□ -0.98
SMAD4-206ENST00000588860 SSX2IPQ9Y2D8 614 aa8.91□□□□□ -0.98
SMAD4-206ENST00000588860 RPS6KL1Q9Y6S9 549 aa8.91□□□□□ -0.98
SMAD4-206ENST00000588860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 FAM237BA0A1B0GVD1 139 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 COPEO14579 308 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 TSPAN3O60637 253 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 LPXNO60711 386 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 USP1O94782 785 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ASMTLO95671 621 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 PEX11BO96011 259 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 OAS1P00973 400 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CNPP09543 421 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ERVK-10P10266 1014 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CTSAP10619 480 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ALADP13716 330 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ETFBP38117 255 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 NEK3P51956 506 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 YBEYP58557 167 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 HTRA4P83105 476 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 MPP3Q13368 585 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SERINC3Q13530 473 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 HNRNPDQ14103 355 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 FRG1Q14331 258 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 PCSK7Q16549 785 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 C5orf22Q49AR2 442 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ANKRD20A4Q4UJ75 823 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 GKAP1Q5VSY0 366 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 MARC1Q5VT66 337 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 PACS1Q6VY07 963 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 MICALCLQ6ZW33 695 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CYS1Q717R9 158 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 C16orf59Q7L2K0 433 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 HERC6Q8IVU3 1022 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 KLHL23Q8NBE8 558 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 PPHLN1Q8NEY8 458 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 TCP10LQ8TDR4 215 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CERS2Q96G23 380 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SEC16BQ96JE7 1060 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 PRICKLE1Q96MT3 831 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 FCRL3Q96P31 734 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 DDX50Q9BQ39 737 aaKnown RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 RNF38Q9H0F5 515 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SLC25A51Q9H1U9 297 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 RXFP1Q9HBX9 757 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 GKN1Q9NS71 199 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 FGFR1OP2Q9NVK5 253 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SMPD4Q9NXE4 827 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 IL1RAPL1Q9NZN1 696 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SLC17A7Q9P2U7 560 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 SOX13Q9UN79 622 aa8.9□□□□□ -0.98
SMAD4-206ENST00000588860 ZFP37Q9Y6Q3 630 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-206ENST00000588860 CACNA1AO00555 2505 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 NCOR1O75376 2440 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 NOTCH4Q99466 2003 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 LAMA2P24043 3122 aaKnown RBP8.89□□□□□ -0.99
SMAD4-206ENST00000588860 MAGEB16A2A368 324 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CCDC78A2IDD5 438 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 TM9SF1O15321 606 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 TGM5O43548 720 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 PRAMEF11O60813 436 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 LILRB3O75022 631 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CSPG5O95196 566 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CXCL14O95715 111 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 LRG1P02750 347 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 KLKB1P03952 638 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 RHOCP08134 193 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 TAC1P20366 129 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 ADRA1DP25100 572 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CNTFP26441 200 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 NMBRP28336 390 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CTNNB1P35222 781 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 ADRA1AP35348 466 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CCNFP41002 786 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CD86P42081 329 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 NUMBP49757 651 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 SGSHP51688 502 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 CDH4P55283 916 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 OXCT1P55809 520 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 WNT3AP56704 352 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 MAXP61244 160 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 RPS24P62847 133 aaKnown RBP8.89□□□□□ -0.99
SMAD4-206ENST00000588860 DSC2Q02487 901 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 GNA12Q03113 381 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 SLC18A2Q05940 514 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 SLC10A7Q0GE19 358 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 SF3A3Q12874 501 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMAD4-206ENST00000588860 SEPT6Q14141 434 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF235Q14590 738 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 LBRQ14739 615 aaKnown RBP8.89□□□□□ -0.99
SMAD4-206ENST00000588860 POU6F1Q14863 301 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 MROH9Q5TGP6 573 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 TMCO4Q5TGY1 634 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF449Q6P9G9 518 aa8.89□□□□□ -0.99
SMAD4-206ENST00000588860 PSRC1Q6PGN9 363 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-206ENST00000588860 KDELC1Q6UW63 502 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms