RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 SMAD1Q15797 465 aaKnown RBP11.46□□□□□ -0.57
ACTN4-209ENST00000586538 C15orf59Q2T9L4 293 aaPredicted RBP11.46□□□□□ -0.57
ACTN4-209ENST00000586538 PARP15Q460N3 678 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 DPY19L3Q6ZPD9 716 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 MON1BQ7L1V2 547 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 SLCO6A1Q86UG4 719 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 NLRP14Q86W24 1093 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 PROSER1Q86XN7 944 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 RYBPQ8N488 228 aaPredicted RBP11.46□□□□□ -0.57
ACTN4-209ENST00000586538 TMEM145Q8NBT3 493 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 OR2AP1Q8NGE2 309 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 ARHGEF2Q92974 986 aaKnown RBP11.46□□□□□ -0.57
ACTN4-209ENST00000586538 TRIM11Q96F44 468 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 C1QTNF7Q9BXJ2 289 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 ZDHHC6Q9H6R6 413 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 TOR4AQ9NXH8 423 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 HECAQ9UBI9 543 aaPredicted RBP11.46□□□□□ -0.57
ACTN4-209ENST00000586538 DKK4Q9UBT3 224 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 ZNF212Q9UDV6 495 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 BTBD3Q9Y2F9 522 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 HS3ST3A1Q9Y663 406 aa11.46□□□□□ -0.57
ACTN4-209ENST00000586538 USP24Q9UPU5 2620 aa11.46□□□□□ -0.58
ACTN4-209ENST00000586538 K7ERQ8 282 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 NEMP1O14524 444 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 KCNK3O14649 394 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 EPHB6O15197 1021 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 ZMPSTE24O75844 475 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 POP4O95707 220 aaKnown RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 IGSF6O95976 241 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 TNFAIP3P21580 790 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 EPHB2P29323 1055 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 RFC1P35251 1148 aaPredicted RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SUOXP51687 545 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 ZNF135P52742 658 aaPredicted RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 METAP1P53582 386 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 HDAC4P56524 1084 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 TYRO3Q06418 890 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SGCGQ13326 291 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 INO80DQ53TQ3 878 aaPredicted RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 ZNF805Q5CZA5 627 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 ACAD10Q6JQN1 1059 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 WDR59Q6PJI9 974 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 GATAD2AQ86YP4 633 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 RTL3Q8N8U3 475 aaKnown RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 DENND6BQ8NEG7 585 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 JOSD2Q8TAC2 188 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 ARRDC3Q96B67 414 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 GDAP1L1Q96MZ0 367 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 CNPY3Q9BT09 278 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 DUSP23Q9BVJ7 150 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 TMPRSS4Q9NRS4 437 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 PARVAQ9NVD7 372 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 NCKIPSDQ9NZQ3 722 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SNX10Q9Y5X0 201 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 WASF2Q9Y6W5 498 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 CABIN1Q9Y6J0 2220 aa11.45□□□□□ -0.58
ACTN4-209ENST00000586538 A0A1W2PQC6 194 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 SRRM3A6NNA2 597 aaPredicted RBP11.44□□□□□ -0.58
ACTN4-209ENST00000586538 PLK4O00444 970 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 TOR1BO14657 336 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 FPGTO14772 594 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 SLC31A1O15431 190 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 CCP110O43303 1012 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 KDELR3O43731 214 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 CREB3O43889 395 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 RNF8O76064 485 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 CKMT2P17540 419 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 GLDCP23378 1020 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 RABIFP47224 123 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
ACTN4-209ENST00000586538 TAS2R38P59533 333 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.585e-12■■■□□ 16
ACTN4-209ENST00000586538 E2F1Q01094 437 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 PTP4A2Q12974 167 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 ZNF284Q2VY69 593 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 ANO6Q4KMQ2 910 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 SFMBT2Q5VUG0 894 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 KYAT3Q6YP21 454 aaKnown RBP11.44□□□□□ -0.58
ACTN4-209ENST00000586538 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 MCOLN2Q8IZK6 566 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 EID2Q8N6I1 236 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 CCDC185Q8N715 623 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 CHST14Q8NCH0 376 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 ASB12Q8WXK4 309 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 NXPE2Q96DL1 559 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 IQCDQ96DY2 449 aa11.44□□□□□ -0.58
ACTN4-209ENST00000586538 PCDHB18PQ96TA0 734 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms