RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 STK38Q15208 465 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 CCNJLQ8IV13 435 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 FBXL13Q8NEE6 735 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 ATL2Q8NHH9 583 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 APOBEC4Q8WW27 367 aaKnown RBP11.36□□□□□ -0.59
CASC3-208ENST00000583649 ASB12Q8WXK4 309 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 RAB7BQ96AH8 199 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 FAM149B1Q96BN6 582 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 HSFY1Q96LI6 401 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 RPRD1AQ96P16 312 aaPredicted RBP11.36□□□□□ -0.59
CASC3-208ENST00000583649 LRRC61Q9BV99 259 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 RAB20Q9NX57 234 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 SIRPGQ9P1W8 387 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 KLF15Q9UIH9 416 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 HS3ST2Q9Y278 367 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 FLNCQ14315 2725 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 TLN1Q9Y490 2541 aaKnown RBP11.35□□□□□ -0.59
CASC3-208ENST00000583649 TMEM110-MUSTN1A8MSY1 372 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 KCNU1A8MYU2 1149 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 AP1G1O43747 822 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 GCATO75600 419 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 DDAH2O95865 285 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 ADRB3P13945 408 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 PNLIPP16233 465 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 GLB1P16278 677 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 TSHRP16473 764 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 HTR1BP28222 390 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 PSMC2P35998 433 aaKnown RBP11.35□□□□□ -0.59
CASC3-208ENST00000583649 PFN3P60673 137 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 ARHGEF7Q14155 803 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 E2F4Q16254 413 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 BEND5Q7L4P6 421 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 FAM186BQ8IYM0 893 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 CEP57L1Q8IYX8 460 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 GRIN3AQ8TCU5 1115 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
CASC3-208ENST00000583649 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
CASC3-208ENST00000583649 MOCOSQ96EN8 888 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 SLC39A13Q96H72 371 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 TAAR9Q96RI9 348 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 INTS2Q9H0H0 1204 aaKnown RBP11.35□□□□□ -0.59
CASC3-208ENST00000583649 FOXJ2Q9P0K8 574 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 GPR34Q9UPC5 381 aa11.35□□□□□ -0.59
CASC3-208ENST00000583649 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 EFCAB7A8K855 629 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 C9orf172C9J069 976 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 CLDN11O75508 207 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 NR2F2P24468 414 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 TBXAS1P24557 533 aaPredicted RBP11.34□□□□□ -0.59
CASC3-208ENST00000583649 ITGB7P26010 798 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 MAN1A1P33908 653 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 RGS7P49802 495 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 MXI1P50539 228 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 ZFP36L1Q07352 338 aaKnown RBP11.34□□□□□ -0.59
CASC3-208ENST00000583649 EIF2B5Q13144 721 aaKnown RBP11.34□□□□□ -0.59
CASC3-208ENST00000583649 HIST2H2BCQ6DN03 193 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 LCLAT1Q6UWP7 414 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 MACC1Q6ZN28 852 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 PIM3Q86V86 326 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 RBFAQ8N0V3 343 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 OR2A12Q8NGT7 310 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 SLC35F5Q8WV83 523 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 JPH3Q8WXH2 748 aaPredicted RBP11.34□□□□□ -0.59
CASC3-208ENST00000583649 NKD1Q969G9 470 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 MYEOVQ96EZ4 313 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 ASPSCR1Q9BZE9 553 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 MIS12Q9H081 205 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 BLZF1Q9H2G9 400 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 PRDM8Q9NQV8 689 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 APPL1Q9UKG1 709 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 FADS3Q9Y5Q0 445 aa11.34□□□□□ -0.59
CASC3-208ENST00000583649 USP9YO00507 2555 aaPredicted RBP11.34□□□□□ -0.59
CASC3-208ENST00000583649 BSNQ9UPA5 3926 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 A0A1W2PQM1 296 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 M0QYV0 167 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 O00370 1275 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 HGSO14964 777 aaPredicted RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 MTSS1O43312 755 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 PPP6R2O75170 966 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 LEFTY1O75610 366 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 RASGRP1O95267 797 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 CTSLP07711 333 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 KRT7P08729 469 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 SRCP12931 536 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 WT1P19544 449 aaPredicted RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 L1CAMP32004 1257 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 CCR1P32246 355 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 ACADSBP45954 432 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 NUMBP49757 651 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 PPP3CAQ08209 521 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 CLPPQ16740 277 aaPredicted RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 ZC3H12AQ5D1E8 599 aaKnown RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 CXorf57Q6NSI4 855 aaKnown RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms