RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PPP2CAP67775 309 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 HNRNPDQ14103 355 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CBWD6Q4V339 395 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CBWD3Q5JTY5 395 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CBWD5Q5RIA9 395 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PM20D1Q6GTS8 502 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 SDE2Q6IQ49 451 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 SERPINA13PQ6UXR4 307 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PIP4K2CQ8TBX8 421 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 TFAP2BQ92481 460 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 KAT5Q92993 513 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 INTS4Q96HW7 963 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 KREMEN1Q96MU8 473 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 NUP58Q9BVL2 599 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 ZDHHC5Q9C0B5 715 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 LHX5Q9H2C1 402 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 GOLPH3LQ9H4A5 285 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 ZSCAN16Q9H4T2 348 aaPredicted RBP8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CISHQ9NSE2 258 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 STOML2Q9UJZ1 356 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 TRAF3IP3Q9Y228 551 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 HPSEQ9Y251 543 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 ZDHHC9Q9Y397 364 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PCDHGB2Q9Y5G2 931 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 A0A1B0GTQ1 180 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 A0A1B0GVL5 298 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 PDXKO00764 312 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 MID1O15344 667 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 PAPSS1O43252 624 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 FSBPO95073 299 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 GNSP15586 552 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 PFKFB1P16118 471 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 NR2F2P24468 414 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 EIF2S3P41091 472 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 ETV3P41162 512 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 AFF3P51826 1226 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 TKTL1P51854 596 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 PITX1P78337 314 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 ADIGQ0VDE8 80 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 STARD3Q14849 445 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 EIF4HQ15056 248 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 GOLGA7BQ2TAP0 167 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 MBLAC2Q68D91 279 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 ARHGAP17Q68EM7 881 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 CHST9Q7L1S5 443 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 SPATS2Q86XZ4 545 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 OR52K2Q8NGK3 314 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 UBA3Q8TBC4 463 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 DDI1Q8WTU0 396 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 TAF4BQ92750 862 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 IGSF8Q969P0 613 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 SEMA4CQ9C0C4 833 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 PRORYQ9H606 182 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 MAGEF1Q9HAY2 307 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 ACTR10Q9NZ32 417 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 GGA2Q9UJY4 613 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 CA5BQ9Y2D0 317 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 TRPM6Q9BX84 2022 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
PPP4R1-225ENST00000583438 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PIEZO2Q9H5I5 2752 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 A0A1W2PNU3 283 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PYCARD-AS1I3L0S3 204 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 IKBKBO14920 756 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 TNFSF14O43557 240 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PCDHGA12O60330 932 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 RPN1P04843 607 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PABPC1P11940 636 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 KRT10P13645 584 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 DRD3P35462 400 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 IRAK1P51617 712 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 AP3M2P53677 418 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PMS1P54277 932 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 GALCP54803 685 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 DAOAP59103 153 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 RPS24P62847 133 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 BNIP3Q12983 259 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PREPLQ4J6C6 727 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 FNDC3BQ53EP0 1204 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 ARTNQ5T4W7 220 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 C9orf64Q5T6V5 341 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PIK3R6Q5UE93 754 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 BSPRYQ5W0U4 402 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 NCEH1Q6PIU2 408 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 FAM181AQ8N9Y4 354 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 SAP25Q8TEE9 199 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 TMEM176AQ96HP8 235 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 RSPH9Q9H1X1 276 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 CYP3A43Q9HB55 503 aa8.16□□□□□ -1.1
PPP4R1-225ENST00000583438 TMEM8AQ9HCN3 771 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms