RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SERPINA13PQ6UXR4 307 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 C4orf22Q6V702 233 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 ARHGAP36Q6ZRI8 547 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 SYT13Q7L8C5 426 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF354CQ86Y25 554 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 SFTPA1Q8IWL2 248 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 ATP11CQ8NB49 1132 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CCNYQ8ND76 341 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 HTR3CQ8WXA8 447 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 MS4A14Q96JA4 679 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 PPP1R2P1Q96PQ5 205 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 LGMNQ99538 433 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 USP29Q9HBJ7 922 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 SUN2Q9UH99 717 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 TRHDEQ9UKU6 1024 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 DNPEPQ9ULA0 475 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 MMP17Q9ULZ9 603 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 R3HDM2Q9Y2K5 976 aaKnown RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 MRFAP1Q9Y605 127 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 SHROOM3Q8TF72 1996 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 C5orf60A6NFR6 353 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 TMEM221A6NGB7 291 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 FAM170BA6NMN3 283 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 WASH3PC4AMC7 463 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 H7C0C1 242 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 M0R296 226 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 KRIT1O00522 736 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 OPHN1O60890 802 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF821O75541 412 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 STK10O94804 968 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 MAP3K6O95382 1288 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 MT-CO1P00395 513 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 VAV1P15498 845 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 AOC1P19801 751 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CR2P20023 1033 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CD72P21854 359 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 IL12RB1P42701 662 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CTSOP43234 321 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 MMP13P45452 471 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ATP5OP48047 213 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 SNRPD1P62314 119 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 SLC10A7Q0GE19 358 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 AP1B1Q10567 949 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 WASHC5Q12768 1159 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ELAVL3Q14576 367 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF235Q14590 738 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 DLG2Q15700 870 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 P3H1Q32P28 736 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 FNDC3BQ53EP0 1204 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 SDE2Q6IQ49 451 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 KLHDC8BQ8IXV7 354 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CHPFQ8IZ52 775 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 SPEM1Q8N4L4 309 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 OR2AP1Q8NGE2 309 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 GRK7Q8WTQ7 553 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CYB5D2Q8WUJ1 264 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 RPL10LQ96L21 214 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 TEKT5Q96M29 485 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 FOXQ1Q9C009 403 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 POLR1EQ9GZS1 481 aaKnown RBP10.57□□□□□ -0.72
CCDC47-203ENST00000580986 MFSD1Q9H3U5 465 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 LMAN1LQ9HAT1 526 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 DLGAP2Q9P1A6 1054 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 PCYOX1Q9UHG3 505 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 SLCO3A1Q9UIG8 710 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 ATP8A1Q9Y2Q0 1164 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
CCDC47-203ENST00000580986 KCNK1O00180 336 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 ADAM23O75077 832 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 GCATO75600 419 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 URI1O94763 535 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 IGSF6O95976 241 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 PRKCHP24723 683 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 PTPN3P26045 913 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 RBL1P28749 1068 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 STK19P49842 368 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 AP1S1P61966 158 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 STARD3Q14849 445 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 CYTH1Q15438 398 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 DARS2Q6PI48 645 aaKnown RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 LINGO4Q6UY18 593 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 SPATA4Q8NEY3 305 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 OR2A12Q8NGT7 310 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 RPLP0P6Q8NHW5 317 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 C1orf54Q8WWF1 131 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 SORCS1Q8WY21 1168 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 ATG4AQ8WYN0 398 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 PTPRN2Q92932 1015 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 MAGOHBQ96A72 148 aaKnown RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 ZNF419Q96HQ0 510 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-203ENST00000580986 GDAP1L1Q96MZ0 367 aa10.56□□□□□ -0.72
CCDC47-203ENST00000580986 SPATA13Q96N96 652 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms