RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 OPHN1O60890 802 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 PALMO75781 387 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ZMPSTE24O75844 475 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 NEBLO76041 1014 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TMCC1O94876 653 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 IGSF6O95976 241 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 RARAP10276 462 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TNNT1P13805 278 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ERCC2P18074 760 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 MAT2AP31153 395 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 HCAR3P49019 387 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CCR5P51681 352 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF75DP51815 510 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CCNHP51946 323 aaPredicted RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 NAP1L1P55209 391 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CDH6P55285 790 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ARF5P84085 180 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SGCGQ13326 291 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SERINC3Q13530 473 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 STAT4Q14765 748 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 INO80DQ53TQ3 878 aaPredicted RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 PPM1JQ5JR12 505 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ATXN7L2Q5T6C5 722 aaPredicted RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 IL27RAQ6UWB1 636 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TMCO3Q6UWJ1 677 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ERN2Q76MJ5 926 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TTC7BQ86TV6 843 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 MINDY1Q8N5J2 469 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 OR6K2Q8NGY2 324 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SLC35G2Q8TBE7 412 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SETD7Q8WTS6 366 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CASKIN2Q8WXE0 1202 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ISG20Q96AZ6 181 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ARHGEF26Q96DR7 871 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 FEM1CQ96JP0 617 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SERAC1Q96JX3 654 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 GDAP1L1Q96MZ0 367 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 PEBP4Q96S96 227 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 KCTD15Q96SI1 283 aaPredicted RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 MAK16Q9BXY0 300 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 PACSIN1Q9BY11 444 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ZDHHC5Q9C0B5 715 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SLC32A1Q9H598 525 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SP110Q9HB58 689 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TM9SF3Q9HD45 589 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CWC15Q9P013 229 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 UBA2Q9UBT2 640 aaPredicted RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF212Q9UDV6 495 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 TPX2Q9ULW0 747 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 PCDHB9Q9Y5E1 797 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ACTL7AQ9Y615 435 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CNOT1A5YKK6 2376 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 ABCA7Q8IZY2 2146 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 CACNA1AO00555 2505 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CXorf51AA0A1B0GTR3 108 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 A0A1W2PPC4 97 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 J3KR12 359 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 SLC31A1O15431 190 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 RNGTTO60942 597 aaKnown RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 PROSCO94903 275 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CER1O95813 267 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 GSRP00390 522 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 UGT2B4P06133 528 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 IGHV4-34P06331 123 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CTSLP07711 333 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 KRT7P08729 469 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 TMEM253P0C7T8 217 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 AMPD1P23109 780 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 IL1R2P27930 398 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 GKP32189 559 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 DRD3P35462 400 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CYLC1P35663 651 aaPredicted RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 NUDT1P36639 197 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 MAGEA1P43355 309 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 NEK3P51956 506 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 METAP1P53582 386 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 LIMK1P53667 647 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 ADPRHP54922 357 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 RACK1P63244 317 aaKnown RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 FOXK2Q01167 660 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 TBX2Q13207 712 aaPredicted RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 SEMA3BQ13214 749 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 HLA-BQ31612 363 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 SETMARQ53H47 684 aaPredicted RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 GDPD4Q6W3E5 623 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 RHOT2Q8IXI1 618 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 BBS5Q8N3I7 341 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 NIPA2Q8N8Q9 360 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 NETO2Q8NC67 525 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 OR2AP1Q8NGE2 309 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 OR2I1PQ8NGU4 316 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 TEKT4Q8WW24 435 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms