RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 TMCC1O94876 653 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SLU7O95391 586 aaKnown RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PEX11BO96011 259 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 MT-CO1P00395 513 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 JCHAINP01591 159 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SRPRAP08240 638 aaKnown RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SRCP12931 536 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PTPN3P26045 913 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 MAGEA9P43362 315 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 KIR2DL1P43626 348 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 MMP13P45452 471 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 STK19P49842 368 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 GDF10P55107 478 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SLC10A7Q0GE19 358 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 WASHC5Q12768 1159 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ZBTB17Q13105 803 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 MTAPQ13126 283 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PPP1R7Q15435 360 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PTPRNQ16849 979 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 P3H1Q32P28 736 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ACCSLQ4AC99 568 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 TEX44Q53QW1 395 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ANKRD20A2Q5SQ80 823 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ANKRD20A1Q5TYW2 823 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ANKRD20A3Q5VUR7 823 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 EGFLAMQ63HQ2 1017 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ITPRIPL1Q6GPH6 555 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CCDC70Q6NSX1 233 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 C8orf74Q6P047 294 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ARHGEF18Q6ZSZ5 1173 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SYDE1Q6ZW31 735 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PID1Q7Z2X4 250 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 JAMLQ86YT9 394 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ZNF567Q8N184 647 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SYNPOQ8N3V7 929 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 MMGT1Q8N4V1 131 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SH2D3CQ8N5H7 860 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 TEX26Q8N6G2 289 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CCDC110Q8TBZ0 833 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CCHCR1Q8TD31 782 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 USP33Q8TEY7 942 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CYB5D2Q8WUJ1 264 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SORCS1Q8WY21 1168 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SLCO2A1Q92959 643 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 RTP4Q96DX8 246 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 RPL10LQ96L21 214 aaKnown RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 TEKT5Q96M29 485 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 SPATA13Q96N96 652 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 AGAP3Q96P47 875 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PSKH2Q96QS6 385 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 IL12RB2Q99665 862 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CEP41Q9BYV8 373 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 PCDH9Q9HC56 1237 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 POLR3BQ9NW08 1133 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 RBM22Q9NW64 420 aaKnown RBP eCLIP6.81□□□□□ -1.322e-6■■■□□ 19
PRPF8-210ENST00000574217 SPATA6Q9NWH7 488 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 C2orf42Q9NWW7 574 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 KLHL8Q9P2G9 620 aaPredicted RBP6.81□□□□□ -1.32
PRPF8-210ENST00000574217 TRHDEQ9UKU6 1024 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 ERVW-1Q9UQF0 538 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 STARD13Q9Y3M8 1113 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 TTLL3Q9Y4R7 772 aa6.81□□□□□ -1.32
PRPF8-210ENST00000574217 CHD5Q8TDI0 1954 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 ZNF318Q5VUA4 2279 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 FAM187AA6NFU0 413 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 K7ERQ8 282 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 RIOK3O14730 519 aaKnown RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 NPC1O15118 1278 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 TTI1O43156 1089 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 ZBTB24O43167 697 aaPredicted RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 RAD51CO43502 376 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 SMAD6O43541 496 aaKnown RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 GALR2O43603 387 aaPredicted RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 ATP9BO43861 1147 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 KLF8O95600 359 aaPredicted RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 CD160O95971 181 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 KRT14P02533 472 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 HLA-DQB2P05538 268 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 HSPA9P38646 679 aaKnown RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 WASP42768 502 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 PTGIRP43119 386 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 NRLP54845 237 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 RHOAP61586 193 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 TUBB4BP68371 445 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 MRPS21P82921 87 aaKnown RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 SATB1Q01826 763 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 ITKQ08881 620 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 PTK6Q13882 451 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 ZNF234Q14588 700 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 CYTH1Q15438 398 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 TRIP13Q15645 432 aaPredicted RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 FNDC3BQ53EP0 1204 aaKnown RBP6.8□□□□□ -1.32
PRPF8-210ENST00000574217 C22orf39Q6P5X5 142 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 TSSK4Q6SA08 328 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 SERPINA13PQ6UXR4 307 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 C4orf22Q6V702 233 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 C1orf210Q8IVY1 113 aa6.8□□□□□ -1.32
PRPF8-210ENST00000574217 CHPFQ8IZ52 775 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms