RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DAAM1Q9Y4D1 1078 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 CELSR3Q9NYQ7 3312 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 C1SP09871 688 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 KRT3P12035 628 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 JUPP14923 745 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 HNRNPA2B1P22626 353 aaKnown RBP21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 ITGB7P26010 798 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 HNF1BP35680 557 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 PTPN9P43378 593 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 CLDN2P57739 230 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 MAPK8IP2Q13387 824 aaPredicted RBP21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 CAMK2BQ13554 666 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 MANEALQ5VSG8 457 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 FBXL19Q6PCT2 694 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 STRADAQ7RTN6 431 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 KANSL1Q7Z3B3 1105 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 TBC1D31Q96DN5 1066 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 GBP4Q96PP9 640 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 SELENOOQ9BVL4 669 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 MAGEB5Q9BZ81 275 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 OSBPL2Q9H1P3 480 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 NDFIP2Q9NV92 336 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 ANO10Q9NW15 660 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 GPSM3Q9Y4H4 160 aa21.54■■□□□ 1.04
CHRNB1-206ENST00000574054 ATRXP46100 2492 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 LGALS16A8MUM7 142 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 FAM72CH0Y354 149 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 PLEKP08567 350 aaPredicted RBP21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 CDK4P11802 303 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 UNGP13051 313 aaPredicted RBP21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 ADRB3P13945 408 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 RHOQP17081 205 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 MAPKAPK2P49137 400 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 MYL5Q02045 173 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 NRG1Q02297 640 aaPredicted RBP21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 UBXN1Q04323 297 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 PTP4A2Q12974 167 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 CLEC16AQ2KHT3 1053 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 FAM72AQ5TYM5 149 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 FAM72DQ6L9T8 149 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 RBM43Q6ZSC3 357 aaKnown RBP21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 FAM72BQ86X60 149 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 CCDC185Q8N715 623 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 OR13H1Q8NG92 308 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 OR6K2Q8NGY2 324 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 TSC1Q92574 1164 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 DKK4Q9UBT3 224 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 HPCAL4Q9UM19 191 aa21.53■■□□□ 1.04
CHRNB1-206ENST00000574054 ARID1BQ8NFD5 2236 aaPredicted RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 LRIG2O94898 1065 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 CALB1P05937 261 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 CKMT2P17540 419 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 CDK11BP21127 795 aaKnown RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 L1CAMP32004 1257 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 RFC1P35251 1148 aaPredicted RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 HDAC4P56524 1084 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 STX1AQ16623 288 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 TMEM259Q4ZIN3 620 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 HES3Q5TGS1 186 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 LEKR1Q6ZMV7 388 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 GCNT7Q6ZNI0 430 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 PARS2Q7L3T8 475 aaKnown RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 PTAR1Q7Z6K3 402 aaPredicted RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 NLRP14Q86W24 1093 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 ARHGEF2Q92974 986 aaKnown RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 KLHL11Q9NVR0 708 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 TMEM248Q9NWD8 314 aa21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 HECAQ9UBI9 543 aaPredicted RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 LIMA1Q9UHB6 759 aaKnown RBP21.52■■□□□ 1.04
CHRNB1-206ENST00000574054 URB1O60287 2271 aaKnown RBP21.52■■□□□ 1.03
CHRNB1-206ENST00000574054 RAMP2O60895 175 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 CD160O95971 181 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 GPD1P21695 349 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 GEMIN4P57678 1058 aaKnown RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 RPS21P63220 83 aaKnown RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 POLD3Q15054 466 aaPredicted RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 HS1BP3Q53T59 392 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 ZNF354CQ86Y25 554 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 HNRNPLLQ8WVV9 542 aaKnown RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 CENPIQ92674 756 aaPredicted RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 ISG20Q96AZ6 181 aaKnown RBP21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 FEM1CQ96JP0 617 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 MAGEH1Q9H213 219 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 FADS3Q9Y5Q0 445 aa21.51■■□□□ 1.03
CHRNB1-206ENST00000574054 A6NNZ2 444 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 KRIT1O00522 736 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 TRIM38O00635 465 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 FFAR2O15552 330 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 SIGLEC6O43699 453 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 DGKAP23743 735 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 GKP32189 559 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 COL28A1Q2UY09 1125 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 KIAA1161Q6NSJ0 714 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 DNAJC24Q6P3W2 148 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 WDR59Q6PJI9 974 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 Q6ZSR6 202 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 PHF13Q86YI8 300 aaPredicted RBP21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 SLC25A45Q8N413 288 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 C3orf20Q8ND61 904 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 NXPE2Q96DL1 559 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms