RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 LRRC8EQ6NSJ5 796 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 IYDQ6PHW0 289 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 OTOP3Q7RTS5 596 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 ZSCAN18Q8TBC5 510 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 TMA16Q96EY4 203 aaKnown RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 TEKT5Q96M29 485 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 OMDQ99983 421 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 XPR1Q9UBH6 696 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 ATP6V1B1P15313 513 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 IREB2P48200 963 aaKnown RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 PRKAA2P54646 552 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 GALNT2Q10471 571 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 SCAPQ12770 1279 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 TSTD2Q5T7W7 516 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 ITPRIPL1Q6GPH6 555 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 CEP97Q8IW35 865 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 MFSD6LQ8IWD5 586 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 CCNYL1Q8N7R7 359 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 KDM1BQ8NB78 822 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 CATSPER1Q8NEC5 780 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 PDCD6IPQ8WUM4 868 aaKnown RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 EZH1Q92800 747 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 MED10Q9BTT4 135 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 SUDS3Q9H7L9 328 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 BCAP29Q9UHQ4 241 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 NRCAMQ92823 1304 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 SLCO1B7G3V0H7 640 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 TADA2AO75478 443 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 PGK1P00558 417 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 CAPNS1P04632 268 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 WARSP23381 471 aaKnown RBP19.33■□□□□ 0.69
SCARF1-206ENST00000573852 RGS2P41220 211 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 PNPLA4P41247 253 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 HCAR3P49019 387 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 CDH17Q12864 832 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 ZNF792Q3KQV3 632 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 SV2CQ496J9 727 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 PAOXQ6QHF9 649 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 DENND6AQ8IWF6 608 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 AHI1Q8N157 1196 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 TMEM102Q8N9M5 508 aaPredicted RBP19.33■□□□□ 0.69
SCARF1-206ENST00000573852 B4GALNT2Q8NHY0 566 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 NXNL1Q96CM4 212 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 GPR78Q96P69 363 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 KIFC1Q9BW19 673 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 GRIP2Q9C0E4 1043 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 VTA1Q9NP79 307 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 AK5Q9Y6K8 562 aa19.33■□□□□ 0.69
SCARF1-206ENST00000573852 RBM47A0AV96 593 aaKnown RBP19.33■□□□□ 0.68
SCARF1-206ENST00000573852 RNASEH2AO75792 299 aaKnown RBP19.33■□□□□ 0.68
SCARF1-206ENST00000573852 MPP1Q00013 466 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 CTBP1Q13363 440 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 KLHDC10Q6PID8 442 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 DTNBP1Q96EV8 351 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 HIC2Q96JB3 615 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 KATNBL1Q9H079 304 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 ZNF696Q9H7X3 374 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 KCNH4Q9UQ05 1017 aa19.33■□□□□ 0.68
SCARF1-206ENST00000573852 MTSS1O43312 755 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 VAPBO95292 243 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 CCNA1P78396 465 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 MAP7Q14244 749 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 RFTN1Q14699 578 aaPredicted RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 WSCD1Q658N2 575 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 GPRIN1Q7Z2K8 1008 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 GPC2Q8N158 579 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 CNTD1Q8N815 330 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 DPF3Q92784 378 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 DLG3Q92796 817 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 CELF6Q96J87 481 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 PRPF18Q99633 342 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 MRPS26Q9BYN8 205 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 DNAI2Q9GZS0 605 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 RBM38Q9H0Z9 239 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 DDIT4Q9NX09 232 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 PTTG2Q9NZH5 202 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 ACOT9Q9Y305 439 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 TNFAIP8O95379 198 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 YBX3P16989 372 aaKnown RBP eCLIP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 AIF1P55008 147 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 DAOAP59103 153 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 MYLK3Q32MK0 819 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 PABPC1LQ4VXU2 614 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 SPNS2Q8IVW8 549 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 SPATA22Q8NHS9 363 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 USP33Q8TEY7 942 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 STON2Q8WXE9 905 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 FTHL17Q9BXU8 183 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 BRD8Q9H0E9 1235 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 NSMCE4AQ9NXX6 385 aa19.32■□□□□ 0.68
SCARF1-206ENST00000573852 PIN4Q9Y237 131 aaKnown RBP19.32■□□□□ 0.68
SCARF1-206ENST00000573852 ZNF189O75820 626 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-206ENST00000573852 ASLP04424 464 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 NCAM1P13591 858 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 DARSP14868 501 aaKnown RBP19.31■□□□□ 0.68
SCARF1-206ENST00000573852 GK5Q6ZS86 529 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 ZFP28Q8NHY6 868 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 DNAJC1Q96KC8 554 aaKnown RBP19.31■□□□□ 0.68
SCARF1-206ENST00000573852 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms