RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 HEMK1Q9Y5R4 338 aaPredicted RBP5.27□□□□□ -1.57
CDC27-215ENST00000573550 USP16Q9Y5T5 823 aa5.27□□□□□ -1.57
CDC27-215ENST00000573550 RTL9Q8NET4 1388 aa5.27□□□□□ -1.57
CDC27-215ENST00000573550 NUP98P52948 1817 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 A0A087WV62 115 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 LOC105369274A0A096LPK9 316 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 LOC102723532A0A0G2JNH3 316 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ABHD14A-ACY1A0A1B0GW23 586 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 BECN2A8MW95 431 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 TTC34A8MYJ7 566 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ASNA1O43681 348 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 CER1O95813 267 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 SETSIPP0DME0 302 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 HOXA7P31268 230 aaPredicted RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 SLC8A1P32418 973 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 MMP13P45452 471 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ME1P48163 572 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 NT5C2P49902 561 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 AGTR2P50052 363 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ALDH18A1P54886 795 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 CCZ1BP86790 482 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 CCZ1P86791 482 aaPredicted RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 HSF1Q00613 529 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 GABPB1Q06547 395 aaPredicted RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 DMTNQ08495 405 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 DMWDQ09019 674 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 NCBP1Q09161 790 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 ZRSR1Q15695 479 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 ALX1Q15699 326 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 CAMK4Q16566 473 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 FAM110CQ1W6H9 321 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 LRCH2Q5VUJ6 765 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 FAM173BQ6P4H8 233 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 CPLX2Q6PUV4 134 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 RBM44Q6ZP01 1051 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 C11orf57Q6ZUT1 292 aaPredicted RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 UBE2Q1Q7Z7E8 422 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 TTC30AQ86WT1 665 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 OR4N4Q8N0Y3 316 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 FSIP1Q8NA03 581 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 FAM71BQ8TC56 605 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 PIGOQ8TEQ8 1089 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 SCARB1Q8WTV0 552 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 STYXQ8WUJ0 223 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ERO1AQ96HE7 468 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 C8orf76Q96K31 380 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 TCEANC2Q96MN5 208 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ZNF830Q96NB3 372 aaPredicted RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 PRPF18Q99633 342 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 SENP7Q9BQF6 1050 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 GOLPH3LQ9H4A5 285 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 TRNAU1APQ9NX07 287 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 TUBE1Q9UJT0 475 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 SCN7AQ01118 1682 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 ROBO1Q9Y6N7 1651 aa5.26□□□□□ -1.57
CDC27-215ENST00000573550 MYO5AQ9Y4I1 1855 aaKnown RBP5.26□□□□□ -1.57
CDC27-215ENST00000573550 PHLPP2Q6ZVD8 1323 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 DUOX1Q9NRD9 1551 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 LAMB1P07942 1786 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SLC22A23A1A5C7 686 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 GOLGA6L9A6NEM1 432 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 PPEF2O14830 753 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SPTLC2O15270 562 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 FFAR2O15552 330 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CNOT3O75175 753 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 RPP40O75818 363 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 SLC3A2P08195 630 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 UQCRFS1P1P0C7P4 283 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SKILP12757 684 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 TNNT1P13805 278 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 FDPSP14324 419 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 U2AF2P26368 475 aaKnown RBP eCLIP5.25□□□□□ -1.574e-9■■■■■ 27.7
CDC27-215ENST00000573550 LIFRP42702 1097 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SOX2P48431 317 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 RPS13P62277 151 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 ZNF91Q05481 1191 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 TRDNQ13061 729 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CBFBQ13951 182 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SPARCL1Q14515 664 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 SLC39A14Q15043 492 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 PPP2R5BQ15173 497 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 STK38Q15208 465 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CCDC57Q2TAC2 916 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 KIF6Q6ZMV9 814 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CCDC129Q6ZRS4 1044 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 TRABD2AQ86V40 505 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CCAR2Q8N163 923 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 SPC24Q8NBT2 197 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 ZNF397Q8NF99 534 aaPredicted RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 KIF18AQ8NI77 898 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 WASF1Q92558 559 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 PIGKQ92643 395 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 CELF1Q92879 486 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 CUL5Q93034 780 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 TRMT61AQ96FX7 289 aaKnown RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 PKNOX2Q96KN3 472 aa5.25□□□□□ -1.57
CDC27-215ENST00000573550 ZNF48Q96MX3 618 aaPredicted RBP5.25□□□□□ -1.57
CDC27-215ENST00000573550 SEC62Q99442 399 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms