RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CHD5Q8TDI0 1954 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 FAM72CH0Y354 149 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 K7ERQ8 282 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.935e-7■□□□□ 9
NDE1-207ENST00000573203 MCF2LO15068 1137 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 SMAD6O43541 496 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 RTN2O75298 545 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 KCNK5O95279 499 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 GZMAP12544 262 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 GLDCP23378 1020 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 PSMA2P25787 234 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 CD27P26842 260 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 CASQ1P31415 396 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 L1CAMP32004 1257 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 ETFBP38117 255 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 GCGRP47871 477 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 CSNK1EP49674 416 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 NOVA1P51513 510 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 AFF3P51826 1226 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 VAV2P52735 878 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 AIF1P55008 147 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 GNG11P61952 73 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 SLC20A2Q08357 652 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 SCAPQ12770 1279 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 GRIK2Q13002 908 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 MAMLD1Q13495 774 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 SPA17Q15506 151 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 TEAD4Q15561 434 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 POM121L1PQ3SYA9 428 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 FAM72AQ5TYM5 149 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 PLEKHA7Q6IQ23 1121 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 FAM72DQ6L9T8 149 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 RETSATQ6NUM9 610 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 C22orf39Q6P5X5 142 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 NCEH1Q6PIU2 408 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 SYT10Q6XYQ8 523 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 ADAT2Q7Z6V5 191 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 VPS36Q86VN1 386 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 NLRP14Q86W24 1093 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 FAM72BQ86X60 149 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 DNAAF5Q86Y56 855 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 PYROXD2Q8N2H3 581 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 OR2I1PQ8NGU4 316 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 OR2T34Q8NGX1 318 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 PIP4K2CQ8TBX8 421 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 ZNF653Q96CK0 615 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 TRIM11Q96F44 468 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.27□□□□□ -0.93
NDE1-207ENST00000573203 SLC32A1Q9H598 525 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 TM9SF3Q9HD45 589 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 TMEM248Q9NWD8 314 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
NDE1-207ENST00000573203 DNAI1Q9UI46 699 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 SARDHQ9UL12 918 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 FZD10Q9ULW2 581 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
NDE1-207ENST00000573203 TP53BP1Q12888 1972 aaPredicted RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 TMEM131Q92545 1883 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 A0A1B0GVT2 93 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 BTNL10A8MVZ5 291 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 PLK4O00444 970 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 GIPC1O14908 333 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CREB3O43889 395 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 RAMP2O60895 175 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 ZMPSTE24O75844 475 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 RNF8O76064 485 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CER1O95813 267 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 PRNPP04156 253 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 IGHV4-34P06331 123 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 ADRB1P08588 477 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CSRP1P21291 193 aaKnown RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 EPHB2P29323 1055 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CHRNA3P32297 505 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 DRD3P35462 400 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 ACVRL1P37023 503 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 EIF4A3P38919 411 aaKnown RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 SERPINH1P50454 418 aaKnown RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 DNA2P51530 1060 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 METAP1P53582 386 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 ADPRHP54922 357 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 OGDHQ02218 1023 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 KIF5AQ12840 1032 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 POLD3Q15054 466 aaPredicted RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 N4BP2L1Q5TBK1 243 aaPredicted RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 IL27RAQ6UWB1 636 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms