RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
NDE1-206ENST00000572967 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 CCDC181Q5TID7 509 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 PAPD7Q5XG87 772 aaKnown RBP12.11□□□□□ -0.47
NDE1-206ENST00000572967 RWDD4Q6NW29 188 aaKnown RBP12.11□□□□□ -0.47
NDE1-206ENST00000572967 SPOCD1Q6ZMY3 1216 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
NDE1-206ENST00000572967 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 FIBINQ8TAL6 211 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 KRT35Q92764 455 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 SIK2Q9H0K1 926 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 C6orf106Q9H6K1 298 aaPredicted RBP12.11□□□□□ -0.47
NDE1-206ENST00000572967 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
NDE1-206ENST00000572967 A0A1B0GTW7 788 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 TCAF2A6NFQ2 919 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 E9PAM4 449 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 ENC1O14682 589 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 CREB3O43889 395 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 CLDN11O75508 207 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 LRIG2O94898 1065 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 SEMA4FO95754 770 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 ASLP04424 464 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 RHOQP17081 205 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 PSMD8P48556 350 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 MAPKAPK2P49137 400 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 SHC2P98077 582 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 CKAP4Q07065 602 aaKnown RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 SEMA3BQ13214 749 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 RNF219Q5W0B1 726 aaPredicted RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 LZTR1Q8N653 840 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 CADM4Q8NFZ8 388 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 FAM71BQ8TC56 605 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 GANCQ8TET4 914 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 RPL10LQ96L21 214 aaKnown RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 MRGPRX3Q96LB0 322 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 FRMD8P1Q9BZ68 369 aaPredicted RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 OSBPL8Q9BZF1 889 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 HOMER3Q9NSC5 361 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 SERGEFQ9UGK8 458 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
NDE1-206ENST00000572967 ERVW-1Q9UQF0 538 aa12.1□□□□□ -0.47
NDE1-206ENST00000572967 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 DOCK4Q8N1I0 1966 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 LAMA1P25391 3075 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 IGLV3-10A0A075B6K4 115 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 A0A1W2PP55 124 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 APOL1O14791 398 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 MID1O15344 667 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 BCAT2O15382 392 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 CEP104O60308 925 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 FSBPO95073 299 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 TCF4P15884 667 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 MZF1P28698 734 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 CDKN2BP42772 138 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 MARCKSL1P49006 195 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 CDH4P55283 916 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 FAM193AP78312 1265 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 SIM1P81133 766 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 HNRNPA1L2Q32P51 320 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 MANEALQ5VSG8 457 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 FBXL22Q6P050 247 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 DNASE2BQ8WZ79 361 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 ALG3Q92685 438 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 TTC17Q96AE7 1141 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 CAMK1GQ96NX5 476 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 CSPG4P5Q96PW8 444 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 PRMT1Q99873 361 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 BTBD1Q9H0C5 482 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 PABPC3Q9H361 631 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms