RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 HS6ST1O60243 411 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 TOP3BO95985 862 aaKnown RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 PTPRAP18433 802 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 BNIP3Q12983 259 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 TMEM132BQ14DG7 1078 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 PRMT9Q6P2P2 845 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 SIX5Q8N196 739 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 HERPUD2Q9BSE4 406 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 GATA5Q9BWX5 397 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 A0A087WZ62 844 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 A0A0J9YVX5 310 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 CD4P01730 458 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 NCAM1P13591 858 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 UGT1A6P19224 532 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 UGT1A1P22309 533 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 UGT1A4P22310 534 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 UGT1A3P35503 534 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 UGT1A5P35504 534 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 BCAT1P54687 386 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 TLR1Q15399 786 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 NCCRP1Q6ZVX7 275 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 TFAP2BQ92481 460 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 RBBP8Q99708 897 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 PCDHAC1Q9H158 963 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 GIN1Q9NXP7 522 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 STX16-NPEPL1H3BU86 382 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 RAD51BO15315 384 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 NADKO95544 446 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-206ENST00000571088 PCNAP12004 261 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 SLC18A2Q05940 514 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 ZNF846Q147U1 533 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 MYLK3Q32MK0 819 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 SGO1Q5FBB7 561 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 XYLT1Q86Y38 959 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 MIER2Q8N344 545 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 FIG4Q92562 907 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 DEPDC7Q96QD5 511 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
TRPV1-206ENST00000571088 MAGEB16A2A368 324 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NCF1BA6NI72 391 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NCF1CA8MVU1 366 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CABYRO75952 493 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ANXA9O76027 345 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PIGRP01833 764 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 MT-ND1P03886 318 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NFICP08651 508 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NCF1P14598 390 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PAGE2BQ5JRK9 111 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NHSL1Q5SYE7 1610 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 TMEM198Q66K66 360 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 FAM183BPQ6ZVS7 135 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PIWIL4Q7Z3Z4 852 aaKnown RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PLD5Q8N7P1 536 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PKP2Q99959 881 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 MID1IP1Q9NPA3 183 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 LAMB2P55268 1798 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PDZK1P1A8MUH7 402 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 B4GALT4O60513 344 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ERBB2P04626 1255 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 GBE1Q04446 702 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CDH17Q12864 832 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CDHR3Q6ZTQ4 885 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 RMDN1Q96DB5 314 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 OMA1Q96E52 524 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 SPATA17Q96L03 361 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ZNF670Q9BS34 389 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NIFKQ9BYG3 293 aaKnown RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CDT1Q9H211 546 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 TLE6Q9H808 572 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 DSEQ9UL01 958 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 NRP2O60462 931 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 MED26O95402 600 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 HSMCR30P0CW71 290 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 GNA12Q03113 381 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 VAC14Q08AM6 782 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 PPM1LQ5SGD2 360 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 ARMC4Q5T2S8 1044 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 METTL23Q86XA0 190 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 SLC4A11Q8NBS3 891 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 HTRA1Q92743 480 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 CD274Q9NZQ7 290 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 LIMD1Q9UGP4 676 aa13.71□□□□□ -0.21
TRPV1-206ENST00000571088 MAFBQ9Y5Q3 323 aaPredicted RBP13.71□□□□□ -0.21
TRPV1-206ENST00000571088 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.22
TRPV1-206ENST00000571088 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms