RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 C3orf62Q6ZUJ4 267 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 OTOP3Q7RTS5 596 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 PRPF39Q86UA1 669 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 IGDCC3Q8IVU1 814 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 ADGRG2Q8IZP9 1017 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 DDI1Q8WTU0 396 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 IRF7Q92985 503 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 E2F7Q96AV8 911 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 ATP6V1G3Q96LB4 118 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 CYTH2Q99418 400 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 DHRS4Q9BTZ2 278 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 STMN4Q9H169 189 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 PLAC1Q9HBJ0 212 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 DNAJC17Q9NVM6 304 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 BFARQ9NZS9 450 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 ZC3H7BQ9UGR2 993 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
NPLOC4-203ENST00000570300 FAM237BA0A1B0GVD1 139 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 LOC285095A0A1B0GVY8 99 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 RNF40O75150 1001 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 NEBLO76041 1014 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 CD160O95971 181 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 CPP00450 1065 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 AGTP01019 485 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MMP2P08253 660 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 PGAM1P18669 254 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 OAS2P29728 719 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 STX2P32856 288 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 CSNK1DP48730 415 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ARF5P84085 180 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 NIPAL4Q0D2K0 466 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ZNF235Q14590 738 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 KLHL38Q2WGJ6 581 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 KRT71Q3SY84 523 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TTMPQ5BVD1 217 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TCEAL5Q5H9L2 206 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 FSCBQ5H9T9 825 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 DENND5AQ6IQ26 1287 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 RETSATQ6NUM9 610 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 KIAA0907Q7Z7F0 614 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TMEM135Q86UB9 458 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ANKMY2Q8IV38 441 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MFN1Q8IWA4 741 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 PGBD5Q8N414 524 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 CARNMT1Q8N4J0 409 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 C12orf76Q8N812 135 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 USP33Q8TEY7 942 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TTC17Q96AE7 1141 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 STAMBPL1Q96FJ0 436 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MRGPRX2Q96LB1 330 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ASB16Q96NS5 453 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TBL1YQ9BQ87 522 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 SPON2Q9BUD6 331 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 SMG9Q9H0W8 520 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MRM3Q9HC36 420 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 NT5MQ9NPB1 228 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 SPHK2Q9NRA0 654 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 MOCS1Q9NZB8 636 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 FBXO10Q9UK96 956 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 CHMP2BQ9UQN3 213 aa11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 KIF26AQ9ULI4 1882 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-203ENST00000570300 TCRBV9S1A1TA0A576 114 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 RFXAPO00287 272 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 HOXC11O43248 304 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 BANF1O75531 89 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 FAM155BO75949 473 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 MZF1P28698 734 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 SSTR1P30872 391 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 WNT3AP56704 352 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 FAM193AP78312 1265 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 SKOR1P84550 965 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 NR1H3Q13133 447 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 NAB1Q13506 487 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 CYTH1Q15438 398 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 PLEKHG6Q3KR16 790 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 UNC5AQ6ZN44 842 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 OR52K1Q8NGK4 314 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 SPATA22Q8NHS9 363 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 GSDMBQ8TAX9 411 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 OSCP1Q8WVF1 389 aa11.15□□□□□ -0.62
NPLOC4-203ENST00000570300 FGF13Q92913 245 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms