RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SLC46A1Q96NT5 459 aa16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 TKTL2Q9H0I9 626 aa16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 SYNCQ9H7C4 482 aa16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 APEX2Q9UBZ4 518 aa16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 IPO11Q9UI26 975 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 U3KQA8 63 aa16.08■□□□□ 0.16
HERPUD1-215ENST00000568676 IGLV3-10A0A075B6K4 115 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ILVBLA1L0T0 632 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 EME2A4GXA9 379 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 BECN2A8MW95 431 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 B8ZZF3 427 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 K7ERQ8 282 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 FPGTO14772 594 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 AQP9O43315 295 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 SMAD6O43541 496 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 TSPAN6O43657 245 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 LEFTY1O75610 366 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 CNTN5O94779 1100 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 C6P13671 934 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 OR1E1P30953 314 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 L1CAMP32004 1257 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 KRT9P35527 623 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 SCNN1AP37088 669 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 USP8P40818 1118 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 SKOR1P84550 965 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 SGCGQ13326 291 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 FZD2Q14332 565 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ALFQ53S48 1182 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ISM2Q6H9L7 571 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 RBM44Q6ZP01 1051 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 DPY19L3Q6ZPD9 716 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 PLPP6Q8IY26 295 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ZNF683Q8IZ20 524 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ARL14Q8N4G2 192 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 CHST14Q8NCH0 376 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 TTC9Q92623 222 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 NAT6Q93015 286 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 NPY6RQ99463 290 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 IL12RB2Q99665 862 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 HEPHQ9BQS7 1158 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 PIGVQ9NUD9 493 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 SATB2Q9UPW6 733 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 CTNND2Q9UQB3 1225 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 FADS3Q9Y5Q0 445 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 WASF2Q9Y6W5 498 aa16.07■□□□□ 0.16
HERPUD1-215ENST00000568676 CFAP46Q8IYW2 2715 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 GTPBP10A4D1E9 387 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 POM121BA6NF01 834 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 NEBLO76041 1014 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 PAK4O96013 591 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 GGCXP38435 758 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 SERPINH1P50454 418 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 MORC3Q14149 939 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 PTK2BQ14289 1009 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 NR0B2Q15466 257 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 C3orf38Q5JPI3 329 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 ARHGEF26Q96DR7 871 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 MED8Q96G25 268 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 C1QTNF2Q9BXJ5 285 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 OSBPL2Q9H1P3 480 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 RETREG1Q9H6L5 497 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
HERPUD1-215ENST00000568676 A0A0D9SEW6 157 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 K7ENP7 123 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 TOR1BO14657 336 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ADCY5O95622 1261 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ERBB2P04626 1255 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 JUNDP17535 347 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 TGM2P21980 687 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ETFBP38117 255 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 PDE1CQ14123 709 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 CDKN3Q16667 212 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ARHGAP44Q17R89 818 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 SLC25A52Q3SY17 297 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ZNF542PQ5EBM4 170 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 LINGO4Q6UY18 593 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 PASD1Q8IV76 773 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 WDR36Q8NI36 951 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 HAPLN3Q96S86 360 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 TNKS2Q9H2K2 1166 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 ENTPD2Q9Y5L3 495 aa16.05■□□□□ 0.16
HERPUD1-215ENST00000568676 CPED1A4D0V7 1026 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 CDRT15L2A8MXV6 281 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 ZNF821O75541 412 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 BMP6P22004 513 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 SULT1E1P49888 294 aa16.04■□□□□ 0.16
HERPUD1-215ENST00000568676 BPIFB4P59827 614 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms