RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 IFT43Q96FT9 208 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 IMP4Q96G21 291 aaKnown RBP8.36□□□□□ -1.07
BBS4-214ENST00000568535 CFAP36Q96G28 342 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 PSKH2Q96QS6 385 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 FEM1AQ9BSK4 669 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 MLPHQ9BV36 600 aaPredicted RBP8.36□□□□□ -1.07
BBS4-214ENST00000568535 IGFLR1Q9H665 355 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 ACSS3Q9H6R3 686 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 PDFQ9HBH1 243 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 LMCD1Q9NZU5 365 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
BBS4-214ENST00000568535 NOVA2Q9UNW9 492 aaKnown RBP8.36□□□□□ -1.07
BBS4-214ENST00000568535 IQANK1A0A1B0GTG1 560 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 TCRBV9S1A1TA0A576 114 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SMIM23A6NLE4 172 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 POC1B-GALNT4F8VUJ3 575 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 PMPCBO75439 489 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 BANF1O75531 89 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 EPOP01588 193 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 INHBAP08476 426 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SERPINF2P08697 491 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 PAMP19021 973 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 CA4P22748 312 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 MGAT1P26572 445 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 GBP2P32456 591 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 GRIA1P42261 906 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SLCO1A2P46721 670 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SGSHP51688 502 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 GPX6P59796 221 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 NTHL1P78549 312 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SULT2A1Q06520 285 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 NSUN2Q08J23 767 aaKnown RBP eCLIP8.35□□□□□ -1.07
BBS4-214ENST00000568535 NAB1Q13506 487 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 KCNC3Q14003 757 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 FRG1Q14331 258 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 SPARCL1Q14515 664 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 DMC1Q14565 340 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ZNF77Q15935 545 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 LONRF1Q17RB8 773 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SKIDA1Q1XH10 827 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 PCID2Q5JVF3 399 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ATAT1Q5SQI0 421 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 RARS2Q5T160 578 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 KCTD16Q68DU8 428 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 CXorf57Q6NSI4 855 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 CES5AQ6NT32 575 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 CAPN12Q6ZSI9 719 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 TPGS1Q6ZTW0 290 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ZNF534Q76KX8 674 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 GPR149Q86SP6 731 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ARID3BQ8IVW6 561 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.35□□□□□ -1.07
BBS4-214ENST00000568535 EFHBQ8N7U6 833 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 DCAF4L2Q8NA75 395 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 PPHLN1Q8NEY8 458 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 SPATA22Q8NHS9 363 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 GABPB2Q8TAK5 448 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 IRF7Q92985 503 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 TTC17Q96AE7 1141 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 E2F7Q96AV8 911 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ARL8AQ96BM9 186 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 OXNAD1Q96HP4 312 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 XPO6Q96QU8 1125 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 FICDQ9BVA6 458 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SLC2A11Q9BYW1 496 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SMG9Q9H0W8 520 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 CNOT10Q9H9A5 744 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 SPHK2Q9NRA0 654 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 GDE1Q9NZC3 331 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 UBP1Q9NZI7 540 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 SENP1Q9P0U3 644 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 PSMC3IPQ9P2W1 217 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 LGALS13Q9UHV8 139 aa8.35□□□□□ -1.07
BBS4-214ENST00000568535 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
BBS4-214ENST00000568535 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.34□□□□□ -1.07
BBS4-214ENST00000568535 FAM237BA0A1B0GVD1 139 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 TNFRSF10AO00220 468 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 SCAMP3O14828 347 aaKnown RBP8.34□□□□□ -1.07
BBS4-214ENST00000568535 MAP3K13O43283 966 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 USP12O75317 370 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 USP1O94782 785 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 MT-CYBP00156 380 aaPredicted RBP8.34□□□□□ -1.07
BBS4-214ENST00000568535 CEBPBP17676 345 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 KRT15P19012 456 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 HLA-DPA1P20036 260 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 NR1D1P20393 614 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 PRKCHP24723 683 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 ADRA1DP25100 572 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
BBS4-214ENST00000568535 ADRA1AP35348 466 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 CSKP41240 450 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 CD86P42081 329 aa8.34□□□□□ -1.07
BBS4-214ENST00000568535 MAPK8P45983 427 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms