RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TEX26Q8N6G2 289 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 NSMCE1Q8WV22 266 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 KLHL5Q96PQ7 755 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 CWH43Q9H720 699 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 ZNF395Q9H8N7 513 aaPredicted RBP18.39■□□□□ 0.53
SMPD3-211ENST00000568373 VPS45Q9NRW7 570 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 THAP1Q9NVV9 213 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 DNMT3LQ9UJW3 386 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 TRIM33Q9UPN9 1127 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 MIA3Q5JRA6 1907 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 A0A096LPK6 155 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 MGRN1O60291 552 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TARSP26639 723 aaKnown RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 HADHAP40939 763 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 CHRNA4P43681 627 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 MAPKAPK2P49137 400 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 KCNQ1P51787 676 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TLE2Q04725 743 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TNK2Q07912 1038 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 PCSK7Q16549 785 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 CCDC153Q494R4 210 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ESRP1Q6NXG1 681 aaKnown RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 KDELC2Q7Z4H8 507 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ZC3HC1Q86WB0 502 aaKnown RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 PPP1R14CQ8TAE6 165 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 SKA1Q96BD8 255 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 MYEOVQ96EZ4 313 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 IGSF21Q96ID5 467 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 C20orf27Q9GZN8 174 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 RHOJQ9H4E5 214 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 CAB39LQ9H9S4 337 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ARNT2Q9HBZ2 717 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 KCNK4Q9NYG8 393 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 DNAJC6O75061 913 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 T-ENOLP0DO92 83 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 FGF3P11487 239 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TACR2P21452 398 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 KCNA4P22459 653 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ARNTP27540 789 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 OR1E1P30953 314 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ATP5C1P36542 298 aaKnown RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 GMPRP36959 345 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ARCN1P48444 511 aaKnown RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 YBEYP58557 167 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 MAXP61244 160 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 IL10RBQ08334 325 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 SERINC3Q13530 473 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ARMC3Q5W041 872 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 CLEC14AQ86T13 490 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ARID3BQ8IVW6 561 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-211ENST00000568373 PARP9Q8IXQ6 854 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 PDZD8Q8NEN9 1154 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TOX2Q96NM4 488 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 GPR22Q99680 433 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 ATP13A1Q9HD20 1204 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 SAR1AQ9NR31 198 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 TREX1Q9NSU2 369 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 COPG2Q9UBF2 871 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 BPTFQ12830 3046 aa18.38■□□□□ 0.53
SMPD3-211ENST00000568373 E2F8A0AVK6 867 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 VAPBO95292 243 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 SERPINB3P29508 390 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 CD86P42081 329 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 LBX1P52954 281 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 CDK18Q07002 472 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 ITKQ08881 620 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 IKBKEQ14164 716 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 DLG2Q15700 870 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 UGP2Q16851 508 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 CTC1Q2NKJ3 1217 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 SNX30Q5VWJ9 437 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 KIAA1841Q6NSI8 718 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 PLD6Q8N2A8 252 aaKnown RBP18.37■□□□□ 0.53
SMPD3-211ENST00000568373 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 ZNF512Q96ME7 567 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-211ENST00000568373 PRKD2Q9BZL6 878 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 LRMDAQ9H2I8 198 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 ZNF358Q9NW07 568 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 AFF4Q9UHB7 1163 aaKnown RBP18.37■□□□□ 0.53
SMPD3-211ENST00000568373 HAO1Q9UJM8 370 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 F5H5T6 163 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 C2P06681 752 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 MMP2P08253 660 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 PAMP19021 973 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 GRM3Q14832 879 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 ACVR1CQ8NER5 493 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 SLC2A6Q9UGQ3 507 aa18.37■□□□□ 0.53
SMPD3-211ENST00000568373 ZNF840PA6NDX5 716 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 C2orf71A6NGG8 1288 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 CBX6O95503 412 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 SERPINE1P05121 402 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 KRT16P08779 473 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 MNX1P50219 401 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-211ENST00000568373 CSRP3P50461 194 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 DSC2Q02487 901 aa18.36■□□□□ 0.53
SMPD3-211ENST00000568373 ZBTB16Q05516 673 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms