RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 APOA1P02647 267 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 MPOP05164 745 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 SMIM18P0DKX4 95 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 TEX44Q53QW1 395 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 WDTC1Q8N5D0 677 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 POC5Q8NA72 575 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 CRYGNQ8WXF5 182 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 KCTD14Q9BQ13 255 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 HEPHQ9BQS7 1158 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 CNTN3Q9P232 1028 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZNF70Q9UC06 446 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 MFHAS1Q9Y4C4 1052 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 CROCCQ5TZA2 2017 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 PSMD11O00231 422 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 HTRA2O43464 458 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 SUPT20HL2P0C7V6 817 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 KCNA2P16389 499 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 PAMP19021 973 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 RBP5P82980 135 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 UGP2Q16851 508 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZNF829Q3KNS6 432 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 C4orf22Q6V702 233 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 NAPRTQ6XQN6 538 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 SLCO6A1Q86UG4 719 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZNF276Q8N554 614 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZNF280CQ8ND82 737 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 KLHL32Q96NJ5 620 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 TWNKQ96RR1 684 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 SENP6Q9GZR1 1112 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 STAP1Q9ULZ2 295 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 U3KQV3 271 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ERI2A8K979 691 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 SNNO75324 88 aaPredicted RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 GSTT2P0CG29 244 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 GSTT2BP0CG30 244 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 STAG3L1P0CL83 205 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 TXNP10599 105 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 MTHFD1P11586 935 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 ZNF12P17014 697 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ALOX12P18054 663 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 PRKCHP24723 683 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 TGFBIQ15582 683 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 EEF1DP3Q658K8 133 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ERO1BQ86YB8 467 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 OR7A2PQ8NGA2 310 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 RERGLQ9H628 205 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
PALB2-206ENST00000568219 IGSF9Q9P2J2 1179 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 BTRCQ9Y297 605 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 KIF1AQ12756 1690 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 FAM159BA6NKW6 160 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 LACTBL1A8MY62 500 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 TMX2-CTNND1H3BSU7 103 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 NCAM1P13591 858 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 BCAT1P54687 386 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CHSY3Q70JA7 882 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 FSTL5Q8N475 847 aaPredicted RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 GIPC2Q8TF65 315 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 MZB1Q8WU39 189 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 FIG4Q92562 907 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 NAA50Q9GZZ1 169 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 HIPK3Q9H422 1215 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ZNF696Q9H7X3 374 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 GIN1Q9NXP7 522 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 TUBGCP4Q9UGJ1 667 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 C7orf72A4D263 438 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 RGS5O15539 181 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ASNA1O43681 348 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CCDC159P0C7I6 412 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ARPP19P56211 112 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 PRKCQQ04759 706 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CACNB2Q08289 660 aaPredicted RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 MERTKQ12866 999 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CAPSQ13938 189 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 DPYSQ14117 519 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 HSF5Q4G112 596 aaPredicted RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ROGDIQ9GZN7 287 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 MIR1-1HGQ9H1L0 117 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 ST6GALNAC4Q9H4F1 302 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms