RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 ARHGAP25P42331 645 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
FANCA-229ENST00000567988 CCR5P51681 352 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 DPYSL3Q14195 570 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 ACCSLQ4AC99 568 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 FAM46CQ5VWP2 391 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 ARHGAP36Q6ZRI8 547 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 DSG4Q86SJ6 1040 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 VSIG1Q86XK7 387 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 LZTR1Q8N653 840 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 CELF6Q96J87 481 aaKnown RBP12.5□□□□□ -0.41
FANCA-229ENST00000567988 NSMCE3Q96MG7 304 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 SALL4Q9UJQ4 1053 aa12.5□□□□□ -0.41
FANCA-229ENST00000567988 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 H3BRJ5 948 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 KHNYNO15037 678 aaKnown RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 LEFTY1O75610 366 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PRNPP04156 253 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 AMPD1P23109 780 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 ITGB7P26010 798 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 CD27P26842 260 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 RGRP47804 291 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PPP2CBP62714 309 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PPP2CAP67775 309 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 SFSWAPQ12872 951 aaKnown RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 TAZQ16635 292 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 KIAA0895LQ68EN5 471 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 LEKR1Q6ZMV7 388 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PQLC3Q8N755 202 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 NETO2Q8NC67 525 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 HSPH1Q92598 858 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 CCDC114Q96M63 670 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 HEPHQ9BQS7 1158 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 ZNF670Q9BS34 389 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 EIF2B4Q9UI10 523 aaKnown RBP12.49□□□□□ -0.41
FANCA-229ENST00000567988 SLC6A14Q9UN76 642 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 PI4KAP42356 2102 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 RALGAPA1Q6GYQ0 2036 aa12.49□□□□□ -0.41
FANCA-229ENST00000567988 CNOT1A5YKK6 2376 aaKnown RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 A0A1W2PPC4 97 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 MUSKO15146 869 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 BUB1O43683 1085 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 MAFKO60675 156 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 NDUFA10O95299 355 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 ENGP17813 658 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 CR2P20023 1033 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 GKP32189 559 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 CSNK1DP48730 415 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 CDH6P55285 790 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 IL10RBQ08334 325 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 MYLK3Q32MK0 819 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 ATXN7L2Q5T6C5 722 aaPredicted RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 NCBP2-AS2Q69YL0 99 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 TMTC1Q8IUR5 882 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 RAPGEF5Q92565 580 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 OMDQ99983 421 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 PREBQ9HCU5 417 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 IMPACTQ9P2X3 320 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 HECAQ9UBI9 543 aaPredicted RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 SUSD2Q9UGT4 822 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 TPX2Q9ULW0 747 aaKnown RBP12.48□□□□□ -0.41
FANCA-229ENST00000567988 HPCAL4Q9UM19 191 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 NCKAP1Q9Y2A7 1128 aa12.48□□□□□ -0.41
FANCA-229ENST00000567988 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms