RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ZNF821O75541 412 aaPredicted RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 PAK4O96013 591 aaPredicted RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 NME1P15531 152 aaKnown RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 HNRNPKP61978 463 aaKnown RBP eCLIP15.81■□□□□ 0.12
PALB2-205ENST00000567003 KYAT3Q6YP21 454 aaKnown RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 C11orf57Q6ZUT1 292 aaPredicted RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 RBFAQ8N0V3 343 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 DOCK4Q8N1I0 1966 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 LMX1AQ8TE12 382 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 IFT43Q96FT9 208 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 WBP1Q96G27 269 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 DUSP23Q9BVJ7 150 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 SLC17A9Q9BYT1 436 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 TKTL2Q9H0I9 626 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 PLCB1Q9NQ66 1216 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 GGT7Q9UJ14 662 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 AJAP1Q9UKB5 411 aaPredicted RBP15.81■□□□□ 0.12
PALB2-205ENST00000567003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.81■□□□□ 0.12
PALB2-205ENST00000567003 ATP6V1DQ9Y5K8 247 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 ENTPD2Q9Y5L3 495 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 FADS3Q9Y5Q0 445 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 HS3ST3A1Q9Y663 406 aa15.81■□□□□ 0.12
PALB2-205ENST00000567003 SPTY2D1-AS1A0A0U1RR47 76 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 CAPN8A6NHC0 703 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 B8ZZF3 427 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 BIN1O00499 593 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 MUSKO15146 869 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 AQP9O43315 295 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 CSF2P04141 144 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 C6P13671 934 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 ADRB3P13945 408 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 JUNDP17535 347 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 RBMS1P29558 406 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 DNA2P51530 1060 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 NEK3P51956 506 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 RNASE9P60153 205 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 PDE1CQ14123 709 aaPredicted RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 PTPN20Q4JDL3 420 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 ARTNQ5T4W7 220 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 ZCCHC8Q6NZY4 707 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 PARS2Q7L3T8 475 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 PARGQ86W56 976 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 DCAF4L2Q8NA75 395 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 DPH1Q9BZG8 443 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 SYNDIG1Q9H7V2 258 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 USP29Q9HBJ7 922 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 WDR70Q9NW82 654 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 ARHGEF38Q9NXL2 777 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 IPO11Q9UI26 975 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 ITM2BQ9Y287 266 aa15.8■□□□□ 0.12
PALB2-205ENST00000567003 FCF1Q9Y324 198 aaKnown RBP15.8■□□□□ 0.12
PALB2-205ENST00000567003 IGLON5A6NGN9 336 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 SLC28A2O43868 658 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 LZTS3O60299 673 aaPredicted RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 PNMA6AP0CW24 399 aaPredicted RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 SLC9A1P19634 815 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 GKP32189 559 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 NOS2P35228 1153 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 SULT1E1P49888 294 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 RPS21P63220 83 aaKnown RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 SKOR1P84550 965 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 SLC6A3Q01959 620 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 CCDC15Q0P6D6 951 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 EIF2B5Q13144 721 aaKnown RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 C1orf61Q13536 156 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 KIAA1161Q6NSJ0 714 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 TRIM65Q6PJ69 517 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 OR6K2Q8NGY2 324 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 PPP1R16AQ96I34 528 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 SLC46A1Q96NT5 459 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 KLF6Q99612 283 aaPredicted RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 SRRTQ9BXP5 876 aaKnown RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 EVA1BQ9NVM1 165 aa15.79■□□□□ 0.12
PALB2-205ENST00000567003 PNMA8BQ9ULN7 279 aaPredicted RBP15.79■□□□□ 0.12
PALB2-205ENST00000567003 AHCTF1Q8WYP5 2266 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 H3BM21 787 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 K7ENP7 123 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 GCATO75600 419 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 ITGB7P26010 798 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 L1CAMP32004 1257 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 ABL2P42684 1182 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 RABIFP47224 123 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 CXCR3P49682 368 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 CLCN6P51797 869 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 CCNHP51946 323 aaPredicted RBP15.78■□□□□ 0.12
PALB2-205ENST00000567003 PDX1P52945 283 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 CLN3Q13286 438 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 NR0B2Q15466 257 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 TCEA2Q15560 299 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 ZSCAN23Q3MJ62 389 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 INO80CQ6PI98 192 aaPredicted RBP15.78■□□□□ 0.12
PALB2-205ENST00000567003 RBM44Q6ZP01 1051 aaKnown RBP15.78■□□□□ 0.12
PALB2-205ENST00000567003 SLC26A9Q7LBE3 791 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 SETD3Q86TU7 594 aaPredicted RBP15.78■□□□□ 0.12
PALB2-205ENST00000567003 DCP2Q8IU60 420 aaKnown RBP15.78■□□□□ 0.12
PALB2-205ENST00000567003 SLC35F3Q8IY50 421 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 SNRNP27Q8WVK2 155 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms