RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TRMT6Q9UJA5 497 aaKnown RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 SIN3BO75182 1162 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 ASGR1P07306 291 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 RHOCP08134 193 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 RECQLP46063 649 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 RAB10P61026 200 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 POU4F1Q01851 419 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 C16orf59Q7L2K0 433 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 ZNF781Q8N8C0 355 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 NXNL1Q96CM4 212 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 PRDM16Q9HAZ2 1276 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 MID1IP1Q9NPA3 183 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 UXTQ9UBK9 157 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 FAF1Q9UNN5 650 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 CITO14578 2027 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 EME2A4GXA9 379 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 TBKBP1A7MCY6 615 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 TFEBP19484 476 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 PFKFB4Q16877 469 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 RALGPS1Q5JS13 557 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 DENND1AQ8TEH3 1009 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 DIS3LQ8TF46 1054 aaKnown RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 CCDC138Q96M89 665 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CXCL16Q9H2A7 254 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 VRTNQ9H8Y1 702 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 COPS7BQ9H9Q2 264 aaPredicted RBP11.74□□□□□ -0.53
CDH1-210ENST00000566612 ATP13A1Q9HD20 1204 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 ZNF212Q9UDV6 495 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 PKP3Q9Y446 797 aa11.74□□□□□ -0.53
CDH1-210ENST00000566612 A8MX80 341 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FAM72CH0Y354 149 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FGF10O15520 208 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 E2F6O75461 281 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 ANPEPP15144 967 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FMO4P31512 558 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 IRF9Q00978 393 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 CDH18Q13634 790 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 ARL13AQ5H913 290 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 TMTC4Q5T4D3 741 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FAM72AQ5TYM5 149 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FAM72DQ6L9T8 149 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SLC30A9Q6PML9 568 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 ANGPTL8Q6UXH0 198 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FAM72BQ86X60 149 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 HPS6Q86YV9 775 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 RCN3Q96D15 328 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 ZNF333Q96JL9 665 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 RBBP8Q99708 897 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 GATA5Q9BWX5 397 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 RHOJQ9H4E5 214 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 WASF2Q9Y6W5 498 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SOCS7O14512 581 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 TPBGLP0DKB5 382 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 PGGT1BP53609 377 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 LAMB3Q13751 1172 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FASTKQ14296 549 aaKnown RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 ACSBG2Q5FVE4 666 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 CNDP1Q96KN2 507 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SIKE1Q9BRV8 207 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 CAAP1Q9H8G2 361 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SCUBE2Q9NQ36 999 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SOAT2O75908 522 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 F2P00734 622 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 LIMK2P53671 638 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 SLC18A1P54219 525 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 PLOD1Q02809 727 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 RAD51Q06609 339 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 TEDDM1Q5T9Z0 273 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 RNF219Q5W0B1 726 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 OLIG1Q8TAK6 271 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 ING2Q9H160 280 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 GBA3Q9H227 469 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 MMADHCQ9H3L0 296 aaPredicted RBP11.73□□□□□ -0.53
CDH1-210ENST00000566612 APPL1Q9UKG1 709 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 ANKRD6Q9Y2G4 727 aa11.73□□□□□ -0.53
CDH1-210ENST00000566612 FAM159BA6NKW6 160 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CYP2C18P33260 490 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 ZNF135P52742 658 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 SLC18A2Q05940 514 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 KCNA10Q16322 511 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 NOMO2Q5JPE7 1267 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 INTS6LQ5JSJ4 861 aaKnown RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 LIPMQ5VYY2 423 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CIR1Q86X95 450 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
CDH1-210ENST00000566612 SMOQ99835 787 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 ZYG11BQ9C0D3 744 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 CDH19Q9H159 772 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 WDR41Q9HAD4 459 aa11.72□□□□□ -0.53
CDH1-210ENST00000566612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms