RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CCDC150Q8NCX0 1101 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 CCDC114Q96M63 670 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 LENG8Q96PV6 779 aaPredicted RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 TAAR9Q96RI9 348 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 HDAC8Q9BY41 377 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 HOOK1Q9UJC3 728 aaKnown RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SLC25A13Q9UJS0 675 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SETD2Q9BYW2 2564 aaPredicted RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 KIF26BQ2KJY2 2108 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 XPO1O14980 1071 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 NKX2-8O15522 239 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 SPINT1O43278 529 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PRNPP04156 253 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 ALPIP09923 528 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PFKFB1P16118 471 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PTMSP20962 102 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 ITGB7P26010 798 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 CHRNA3P32297 505 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PIK3CAP42336 1068 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 BLKP51451 505 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 NAA30Q147X3 362 aaPredicted RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 ELOCQ15369 112 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PHF19Q5T6S3 580 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 ARHGAP17Q68EM7 881 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 MSANTD2Q6P1R3 559 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 ERN2Q76MJ5 926 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 BHLHA9Q7RTU4 235 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PHACTR4Q8IZ21 702 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 CACNA2D3Q8IZS8 1091 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 SLC34A3Q8N130 599 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 Q8N9G6 341 aaPredicted RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 MYEOVQ96EZ4 313 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 SLC45A3Q96JT2 553 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 PRICKLE1Q96MT3 831 aaPredicted RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 GTPBP4Q9BZE4 634 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 NUCKS1Q9H1E3 243 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 DONSONQ9NYP3 566 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 DKK3Q9UBP4 350 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 GGT7Q9UJ14 662 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 RABGEF1Q9UJ41 708 aa9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 TDRD6O60522 2096 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-205ENST00000565452 RP1P56715 2156 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 PVALEFA0A1B0GWK0 134 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 MKRN2OSH3BPM6 223 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CTSEP14091 401 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 PNLIPP16233 465 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 PDGFRAP16234 1089 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TSHRP16473 764 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 NDUFA8P51970 172 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 YPEL5P62699 121 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 MC1RQ01726 317 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 PPARDQ03181 441 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 ADIGQ0VDE8 80 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 DEFB109BQ30KR1 87 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 FAM26FQ5R3K3 315 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 C1QL3Q5VWW1 255 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TCTN3Q6NUS6 607 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 Q6ZVU0 165 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CCNJLQ8IV13 435 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 RBFAQ8N0V3 343 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 FMR1NBQ8N0W7 255 aaPredicted RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 SCML4Q8N228 414 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CPT1CQ8TCG5 803 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CCDC47Q96A33 483 aaKnown RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 KIAA1143Q96AT1 154 aaPredicted RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 DHX58Q96C10 678 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 NIF3L1Q9GZT8 377 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CLPBQ9H078 707 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TCEAL2Q9H3H9 227 aaPredicted RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CASS4Q9NQ75 786 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CNGB3Q9NQW8 809 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 HESX1Q9UBX0 185 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 SLC12A6Q9UHW9 1150 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 GPR34Q9UPC5 381 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 NAALADL1Q9UQQ1 740 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TP53TG5Q9Y2B4 290 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 RNF215Q9Y6U7 377 aa9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 ZFC3H1O60293 1989 aaKnown RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 TP53BP1Q12888 1972 aaPredicted RBP9.24□□□□□ -0.93
VPS9D1-205ENST00000565452 CRYBG3Q68DQ2 2970 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 RAD51BO15315 384 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 CLDN1O95832 211 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 PRKAR1AP10644 381 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 UGT1A3P35503 534 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 PFN3P60673 137 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 DLG4P78352 724 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms