RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 EFHC2Q5JST6 749 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 SEL1L3Q68CR1 1132 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ACAD10Q6JQN1 1059 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DNAJC24Q6P3W2 148 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DCUN1D2Q6PH85 259 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 BNIPLQ7Z465 357 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 PHF13Q86YI8 300 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 PYROXD2Q8N2H3 581 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 SLC25A45Q8N413 288 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 CCDC185Q8N715 623 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 OR13H1Q8NG92 308 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 OR6K2Q8NGY2 324 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 CENPIQ92674 756 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 FAM131CQ96AQ9 280 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 BMFQ96LC9 184 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 KLHL32Q96NJ5 620 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ABCG4Q9H172 646 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RETREG1Q9H6L5 497 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 NDFIP2Q9NV92 336 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 KLHL11Q9NVR0 708 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 TMEM248Q9NWD8 314 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DNAJC28Q9NX36 388 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ZFR2Q9UPR6 939 aaKnown RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 SIK3Q9Y2K2 1263 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RAXQ9Y2V3 346 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 PCDHGA1Q9Y5H4 931 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 FADS3Q9Y5Q0 445 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 WASF2Q9Y6W5 498 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DMDP11532 3685 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ZNF292O60281 2723 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 SDK1Q7Z5N4 2213 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RALGAPA1Q6GYQ0 2036 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 CFAP54Q96N23 3096 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 A6NNZ2 444 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 C10orf142B7Z368 130 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 TRIM38O00635 465 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 FPGTO14772 594 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 FFAR2O15552 330 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 TSPAN6O43657 245 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 SIGLEC6O43699 453 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 MMP20O60882 483 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ZNF821O75541 412 aaPredicted RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 DKK1O94907 266 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 CAPNS1P04632 268 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ALPPL2P10696 532 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 DGKAP23743 735 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ITGB7P26010 798 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ZNF143P52747 638 aaPredicted RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 RHOAP61586 193 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 RPL7AP62424 266 aaKnown RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 E2F1Q01094 437 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 NRG1Q02297 640 aaPredicted RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 SEMG2Q02383 582 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 C1QBPQ07021 282 aaKnown RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 PTP4A2Q12974 167 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ZNF211Q13398 564 aaPredicted RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 COL28A1Q2UY09 1125 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 CCDC183Q5T5S1 534 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 KIAA1161Q6NSJ0 714 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 GDPD4Q6W3E5 623 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 PLPP6Q8IY26 295 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 MCOLN2Q8IZK6 566 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 AOPEPQ8N6M6 819 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 PAF1Q8N7H5 531 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 NETO2Q8NC67 525 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 OR2AP1Q8NGE2 309 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 FAM174AQ8TBP5 190 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 TSC1Q92574 1164 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 RAB7BQ96AH8 199 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ISG20Q96AZ6 181 aaKnown RBP6.52□□□□□ -1.37
TCF4-228ENST00000565393 LRIG1Q96JA1 1093 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 DCBLD2Q96PD2 775 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 MCEEQ96PE7 176 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ERGIC2Q96RQ1 377 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 NCAPGQ9BPX3 1015 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 CNPY3Q9BT09 278 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 CATSPERBQ9H7T0 1116 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 UCKL1Q9NWZ5 548 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 ZNF212Q9UDV6 495 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 PCSK1NQ9UHG2 260 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 SPTBN4Q9H254 2564 aa6.52□□□□□ -1.37
TCF4-228ENST00000565393 MYH10P35580 1976 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 CPED1A4D0V7 1026 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 POM121BA6NF01 834 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 ZSCAN5CA6NGD5 496 aaPredicted RBP6.51□□□□□ -1.37
TCF4-228ENST00000565393 RASA4BC9J798 803 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 RAD51BO15315 384 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 TEX33O43247 280 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 CCP110O43303 1012 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 RASA4O43374 803 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 AP1G1O43747 822 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 PIAS2O75928 621 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 RNF8O76064 485 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 CD160O95971 181 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 MBD3O95983 291 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 GSRP00390 522 aa6.51□□□□□ -1.37
TCF4-228ENST00000565393 MT-CO3P00414 261 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms