RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 A6NJY4 79 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ZBBXA8MT70 800 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 A8MVJ9 347 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 LEUTXA8MZ59 168 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 LOC110117498-PIK3R3F6TDL0 507 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 MRPS14O60783 128 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF623O75123 536 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 BCAS1O75363 584 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KRT34O76011 436 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ERBB2P04626 1255 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CYP3A4P08684 503 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CYP2D6P10635 497 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PSKH1P11801 424 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SRCP12931 536 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CKMT2P17540 419 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 EIF2AK2P19525 551 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 TCN1P20061 433 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 FGFR4P22455 802 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 NR4A1P22736 598 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 GLDCP23378 1020 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 S100PP25815 95 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 HMGCLP35914 325 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 OPRL1P41146 370 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ETV4P43268 484 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 HK3P52790 923 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 NKX2-5P52952 324 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PRKAA2P54646 552 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 YWHAEP62258 255 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ATP2C1P98194 919 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 GAD2Q05329 585 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PPATQ06203 517 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CD300CQ08708 224 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ORC1Q13415 861 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PTK6Q13882 451 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ERV3-1Q14264 604 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RFTN1Q14699 578 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RAB39AQ14964 217 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 FGD3Q5JSP0 725 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RTP2Q5QGT7 225 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ATAD3CQ5T2N8 411 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 UBAP2Q5T6F2 1119 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 INTS11Q5TA45 600 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PPP1R2P3Q6NXS1 205 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF773Q6PK81 442 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ARCQ7LC44 396 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RRM2BQ7LG56 351 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 NEK8Q86SG6 692 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SLC22A16Q86VW1 577 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 P3H2Q8IVL5 708 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 LGI2Q8N0V4 545 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PLD5Q8N7P1 536 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 MARCH10Q8NA82 808 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KDM1BQ8NB78 822 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 GSTCDQ8NEC7 633 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SRFBP1Q8NEF9 429 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 C7orf57Q8NEG2 295 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 OR52K1Q8NGK4 314 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 OR52N1Q8NH53 320 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RHOXF1Q8NHV9 184 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 DDX54Q8TDD1 881 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CABLES1Q8TDN4 633 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 AP2M1Q96CW1 435 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 VPS39Q96JC1 886 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RADILQ96JH8 1075 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 UHRF1Q96T88 793 aaPredicted RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 GDF15Q99988 308 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 CNPY3Q9BT09 278 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 WNT8AQ9H1J5 351 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 WNT5BQ9H1J7 359 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KCTD10Q9H3F6 313 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SMYD3Q9H7B4 428 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SYNDIG1Q9H7V2 258 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 LIN28AQ9H9Z2 209 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KCNH7Q9NS40 1196 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KANSL3Q9P2N6 904 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 DNMT3BQ9UBC3 853 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 NXF1Q9UBU9 619 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KLHL21Q9UJP4 597 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 TINAGQ9UJW2 476 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 NENFQ9UMX5 172 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ZFR2Q9UPR6 939 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 ENTPD4Q9Y227 616 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 KCNK7Q9Y2U2 307 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RNF11Q9Y3C5 154 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 DMRT1Q9Y5R6 373 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 COPG1Q9Y678 874 aaKnown RBP6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PTCH2Q9Y6C5 1203 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 SESN1Q9Y6P5 492 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
PTPN9-204ENST00000564970 RIC1Q4ADV7 1423 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 EDC4Q6P2E9 1401 aaKnown RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 IGSF1Q8N6C5 1336 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 ADGRA2Q96PE1 1338 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 IRS2Q9Y4H2 1338 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms