RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TMEM26Q6ZUK4 368 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM72BQ86X60 149 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FBXL20Q96IG2 436 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RANBP9Q96S59 729 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 OSBPL6Q9BZF3 934 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ATXN3LQ9H3M9 355 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PIF1Q9H611 641 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SPON1Q9HCB6 807 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 HACL1Q9UJ83 578 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZCWPW2A0A1B0GU75 182 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 YWHAQP27348 245 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RPL26P61254 145 aaKnown RBP20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 YBX1P67809 324 aaKnown RBP20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DNAJC14Q6Y2X3 702 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ARMCX6Q7L4S7 300 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM83AQ86UY5 434 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 REPS2Q8NFH8 660 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LRRC40Q9H9A6 602 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CNOT6Q9ULM6 557 aaKnown RBP20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BTBD19C9JJ37 291 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 LMO2P25791 158 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC7A2P52569 658 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GRM1Q13255 1194 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MXD4Q14582 209 aaPredicted RBP20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZNF618Q5T7W0 954 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CNSTQ6PJW8 725 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 INIPQ9NRY2 104 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GPC4O75487 556 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DPEP1P16444 411 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 HSPA13P48723 471 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SULT2A1Q06520 285 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 POU6F1Q14863 301 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 BBS5Q8N3I7 341 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CLK4Q9HAZ1 481 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 AKT3Q9Y243 479 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MCF2P10911 925 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PTPRAP18433 802 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MAGEA8P43361 318 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NDUFV1P49821 464 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ESRRGP62508 458 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PRKAA1Q13131 559 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CLEC6AQ6EIG7 209 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C16orf87Q6PH81 154 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CEP97Q8IW35 865 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 RNF139Q8WU17 664 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CELF6Q96J87 481 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TEPSINQ96N21 525 aa20.76■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZBTB42B2RXF5 422 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NR2C2P49116 596 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CSE1LP55060 971 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PRKCQQ04759 706 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CARM1Q86X55 608 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZBTB8BQ8NAP8 495 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CXorf38Q8TB03 319 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC35F5Q8WV83 523 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 EXT2Q93063 718 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PLGRKTQ9HBL7 147 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SMOXQ9NWM0 555 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PAIP2BQ9ULR5 123 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 COL11A2P13942 1736 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZNF638Q14966 1978 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SCN1AP35498 2009 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TMEM114B3SHH9 223 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FBP2O00757 339 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 B4GAT1O43505 415 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZBTB11O95625 1053 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MBTD1Q05BQ5 628 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FASTKQ14296 549 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SPANXN3Q5MJ09 141 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SPPL2CQ8IUH8 684 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZNF597Q96LX8 424 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 OSBPL11Q9BXB4 747 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MUC3BQ9H195 1237 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PNPLA3Q9NST1 481 aa20.75■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SH3PXD2BA1X283 911 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZFXP17010 805 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C1QTNF8P60827 252 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PMS2P3Q13401 168 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CAPRIN1Q14444 709 aaKnown RBP20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MAP7D1Q3KQU3 841 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DLG3Q92796 817 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C18orf25Q96B23 403 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CNDP1Q96KN2 507 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FAIMQ9NVQ4 179 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DUS2Q9NX74 493 aaKnown RBP20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 LAMA3Q16787 3333 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 HEATR9A2RTY3 570 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MLNP12872 115 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CHRM3P20309 590 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GNA12Q03113 381 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FAM35AQ86V20 835 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MICALL2Q8IY33 904 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TMEM151AQ8N4L1 468 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 HMGCLL1Q8TB92 370 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ASB9Q96DX5 294 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 POMKQ9H5K3 350 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 POLR1BQ9H9Y6 1135 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CXorf21Q9HAI6 301 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms