RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 INAVAQ3KP66 663 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 SETMARQ53H47 684 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 ERN2Q76MJ5 926 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 OXR1Q8N573 874 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 CHST14Q8NCH0 376 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 FAM174AQ8TBP5 190 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 SERAC1Q96JX3 654 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 CDC6Q99741 560 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 MAGEB5Q9BZ81 275 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 TNKS2Q9H2K2 1166 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 NOL6Q9H6R4 1146 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 IL21RQ9HBE5 538 aa12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-204ENST00000563273 A0A1B0GTQ1 180 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 TMCO5BA8MYB1 307 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 TLR4O00206 839 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 PLK4O00444 970 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 RNF8O76064 485 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 WNT1P04628 370 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 SERPING1P05155 500 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 PCK1P35558 622 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 GRK6P43250 576 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 RXRGP48443 463 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 HCAR3P49019 387 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 NEK3P51956 506 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 NXPH1P58417 271 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 SNRPD1P62314 119 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 SERINC3Q13530 473 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 KCNT1Q5JUK3 1230 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ERMARDQ5T6L9 678 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 HORMAD1Q86X24 394 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ARFGAP1Q8N6T3 406 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 OR2AP1Q8NGE2 309 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 RAB7BQ96AH8 199 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ARRDC3Q96B67 414 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 OSBPL1AQ9BXW6 950 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 AASDHPPTQ9NRN7 309 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 HECAQ9UBI9 543 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 CNOT8Q9UFF9 292 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 AP4E1Q9UPM8 1137 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 MFHAS1Q9Y4C4 1052 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 PCDHB9Q9Y5E1 797 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 ACACBO00763 2458 aa12.44□□□□□ -0.42
NSMCE1-204ENST00000563273 NUMA1Q14980 2115 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 SPAARA0A1B0GVQ0 90 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 FAM221BA6H8Z2 402 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 RASA4BC9J798 803 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 H0Y8X5 98 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 ATMINO43313 823 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 RASA4O43374 803 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 CREB3O43889 395 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 PRPSAP2O60256 369 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 TMCC1O94876 653 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 DKK1O94907 266 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 POP4O95707 220 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 SKILP12757 684 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 TPI1P60174 286 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 FAM193AP78312 1265 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 ZNF284Q2VY69 593 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 POM121L1PQ3SYA9 428 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 TMEM259Q4ZIN3 620 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 TDRD12Q587J7 1177 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 LAYNQ6UX15 382 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 RAB44Q7Z6P3 723 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 NIPA2Q8N8Q9 360 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 GRIN3AQ8TCU5 1115 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 CAMK1GQ96NX5 476 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 LRRC19Q9H756 370 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 APOBEC2Q9Y235 224 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 NEUROG3Q9Y4Z2 214 aa12.43□□□□□ -0.42
NSMCE1-204ENST00000563273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■□□□□ 9.4
NSMCE1-204ENST00000563273 A0A1W2PQU0 124 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 EEF2KO00418 725 aaKnown RBP12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 WNT9AO14904 365 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 BUB1O43683 1085 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 LRCH4O75427 683 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 GYPCP04921 128 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 ADRB3P13945 408 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 MIPP30301 263 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 DNA2P51530 1060 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 SUOXP51687 545 aa12.42□□□□□ -0.42
NSMCE1-204ENST00000563273 RPS21P63220 83 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms