RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PCBP4P57723 403 aaKnown RBP13.24□□□□□ -0.29
SF3B3-202ENST00000562722 GABREP78334 506 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 GNA12Q03113 381 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 TLE3Q04726 772 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 SGCGQ13326 291 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-202ENST00000562722 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 C2CD6Q53TS8 623 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 HSP90AA4PQ58FG1 418 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 CARD16Q5EG05 197 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 BROXQ5VW32 411 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 SMYD5Q6GMV2 418 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 KYAT3Q6YP21 454 aaKnown RBP13.24□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF783Q6ZMS7 281 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 PARGQ86W56 976 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 XYLT1Q86Y38 959 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 IRF2BP1Q8IU81 584 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 PCDH20Q8N6Y1 951 aaKnown RBP13.24□□□□□ -0.29
SF3B3-202ENST00000562722 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF248Q8NDW4 579 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 FAM174AQ8TBP5 190 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 IFT43Q96FT9 208 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 FEM1CQ96JP0 617 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 HAPLN3Q96S86 360 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 DUSP23Q9BVJ7 150 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 TM6SF2Q9BZW4 377 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 NDST4Q9H3R1 872 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 WASF2Q9Y6W5 498 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 KNTC1P50748 2209 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 K7ESM1 405 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 TK2O00142 265 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 FPGTO14772 594 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 SCAMP1O15126 338 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 L1CAMP32004 1257 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 SCNN1AP37088 669 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 RABIFP47224 123 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 GABRB2P47870 512 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 ATP11AP98196 1134 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 RWDD4Q6NW29 188 aaKnown RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 PARS2Q7L3T8 475 aaKnown RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF548Q8NEK5 533 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 OR6K2Q8NGY2 324 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 IFI44Q8TCB0 444 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 CPA5Q8WXQ8 436 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF578Q96N58 590 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 TUBGCP2Q9BSJ2 902 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 HECAQ9UBI9 543 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-202ENST00000562722 FADS3Q9Y5Q0 445 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 FHOD1Q9Y613 1164 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
SF3B3-202ENST00000562722 MYLKQ15746 1914 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CPED1A4D0V7 1026 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 POM121BA6NF01 834 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 RAD51BO15315 384 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF821O75541 412 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ZIC2O95409 532 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 LSM8O95777 96 aaKnown RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CSF2P04141 144 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 GP1BAP07359 652 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CDH5P33151 784 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ETFBP38117 255 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 UBE2HP62256 183 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ARF5P84085 180 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 FGL2Q14314 439 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 FZD2Q14332 565 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 POLD3Q15054 466 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CDKN3Q16667 212 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CDO1Q16878 200 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 CDCP2Q5VXM1 449 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 NAA35Q5VZE5 725 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ZCCHC8Q6NZY4 707 aaKnown RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 EMC1Q8N766 993 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 LMX1AQ8TE12 382 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 BMFQ96LC9 184 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 METTL5Q9NRN9 209 aaKnown RBP13.22□□□□□ -0.29
SF3B3-202ENST00000562722 ACTL7AQ9Y615 435 aa13.22□□□□□ -0.29
SF3B3-202ENST00000562722 SPTY2D1-AS1A0A0U1RR47 76 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 IGLON5A6NGN9 336 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 C16orf96A6NNT2 1141 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 KRIT1O00522 736 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 AQP9O43315 295 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 TSPAN6O43657 245 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 AP1G1O43747 822 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 MMEP08473 750 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 NME1P15531 152 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms