RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PDX1P52945 283 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 EIF2B5Q13144 721 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 CLN3Q13286 438 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 EIF4EBP2Q13542 120 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 TMEM259Q4ZIN3 620 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 RAB6CQ53S08 254 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 CCDC81Q6ZN84 652 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 PARS2Q7L3T8 475 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 ABI3BPQ7Z7G0 1075 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC35F3Q8IY50 421 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 FMR1NBQ8N0W7 255 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 NELFBQ8WX92 580 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 EXTL1Q92935 676 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC2A13Q96QE2 648 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC17A9Q9BYT1 436 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 RAB6CQ9H0N0 254 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 EPB41L5Q9HCM4 733 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 GULP1Q9UBP9 304 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SPTA1P02549 2419 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 K7ENP7 123 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 ALOX15BO15296 676 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 EFSO43281 561 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 ADRB3P13945 408 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 BMP6P22004 513 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 SULT1E1P49888 294 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 UCNP55089 124 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 ERVPABLB-1P60509 514 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 HNRNPKP61978 463 aaKnown RBP eCLIP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 CYP4F2P78329 520 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 LRRC63Q05C16 580 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 TTC39BQ5VTQ0 682 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 INO80CQ6PI98 192 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 RBM44Q6ZP01 1051 aaKnown RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 TMEM110Q86TL2 294 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 VASH2Q86V25 355 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 VPS36Q86VN1 386 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 DRC7Q8IY82 874 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 MED8Q96G25 268 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC46A1Q96NT5 459 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 MED15Q96RN5 788 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 CCDC3Q9BQI4 270 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 HS3ST2Q9Y278 367 aa11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-202ENST00000561960 AHCTF1Q8WYP5 2266 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 SPTY2D1-AS1A0A0U1RR47 76 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 PSMA7O14818 248 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 MED7O43513 233 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CLDN11O75508 207 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 WISP1O95388 367 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 AFPP02771 609 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CSF2P04141 144 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 FAM87AP0C7U9 286 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 NME1P15531 152 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC9A1P19634 815 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 NUDT1P36639 197 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CCNHP51946 323 aaPredicted RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 NEK3P51956 506 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CDH4P55283 916 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 KRT83P78385 493 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 GCNT1Q02742 428 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 NR0B2Q15466 257 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 PTPN20Q4JDL3 420 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 TTI2Q6NXR4 508 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 ZCCHC8Q6NZY4 707 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 OLFML1Q6UWY5 402 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 PHLDB2Q86SQ0 1253 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 PARGQ86W56 976 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 SFTPA2Q8IWL1 248 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CACTIN-AS1Q8N1I8 211 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 JPH3Q8WXH2 748 aaPredicted RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 TBCBQ99426 244 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 IL12RB2Q99665 862 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 WRAP53Q9BUR4 548 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 LRRC61Q9BV99 259 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 MAGEB5Q9BZ81 275 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 CLPBQ9H078 707 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 APOBEC3BQ9UH17 382 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 TPX2Q9ULW0 747 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 TBC1D30Q9Y2I9 924 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 FADS3Q9Y5Q0 445 aa11.91□□□□□ -0.5
NSMCE1-202ENST00000561960 ARHGEF17Q96PE2 2063 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms