RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 GABPB2Q8TAK5 448 aaPredicted RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ZNF333Q96JL9 665 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 FAM167BQ9BTA0 163 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 MAGEH1Q9H213 219 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 RHOJQ9H4E5 214 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 RC3H2Q9HBD1 1191 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 NPHS2Q9NP85 383 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 NT5MQ9NPB1 228 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 SNX15Q9NRS6 342 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 IARS2Q9NSE4 1012 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TXLNGQ9NUQ3 528 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 STK39Q9UEW8 545 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ANKRD6Q9Y2G4 727 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 MTO1Q9Y2Z2 717 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 YIPF1Q9Y548 306 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 HEATR9A2RTY3 570 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 J3KR12 359 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 SEC24AO95486 1093 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 LATS1O95835 1130 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 PROCP04070 461 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 URODP06132 367 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 HMGA1P17096 107 aaKnown RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 OR1E1P30953 314 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 KCNQ1P51787 676 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 CDH4P55283 916 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 NCALDP61601 193 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 TMPRSS15P98073 1019 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 SLC10A7Q0GE19 358 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 BST1Q10588 318 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 ILF2Q12905 390 aaKnown RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 RAB33AQ14088 237 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 BTG3Q14201 252 aaPredicted RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 POU6F1Q14863 301 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 CHI3L2Q15782 390 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 N4BP2L1Q5TBK1 243 aaPredicted RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 CHST9Q7L1S5 443 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 NLRP9Q7RTR0 991 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 ZNF354CQ86Y25 554 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 BBS5Q8N3I7 341 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 PSMG2Q969U7 264 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 VWCEQ96DN2 955 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 PABPC5Q96DU9 382 aaKnown RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 LRRC37BQ96QE4 947 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 AGAP2Q99490 1192 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 GPR22Q99680 433 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 TREX1Q9NSU2 369 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 SPG21Q9NZD8 308 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 EMCNQ9ULC0 261 aa12.82□□□□□ -0.36
AC055717.2-201ENST00000561864 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 COCHO43405 550 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 SNNO75324 88 aaPredicted RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 ATP5BP06576 529 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 APOA4P06727 396 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 PPM1AP35813 382 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 CD86P42081 329 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 SERPINH1P50454 418 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 OCRLQ01968 901 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 ITKQ08881 620 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 ZNF235Q14590 738 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 FASTKD1Q53R41 847 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 FSTL4Q6MZW2 842 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 KIAA0408Q6ZU52 694 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 CLEC14AQ86T13 490 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 CIR1Q86X95 450 aaPredicted RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 VPS39Q96JC1 886 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 MECRQ9BV79 373 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 POLR1EQ9GZS1 481 aaKnown RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 IL1RAPL1Q9NZN1 696 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 UXTQ9UBK9 157 aaPredicted RBP12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 CHKBQ9Y259 395 aa12.81□□□□□ -0.36
AC055717.2-201ENST00000561864 MYLKQ15746 1914 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 A0A096LPK6 155 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 HNRNPCL1O60812 293 aaKnown RBP12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 DNAJC6O75061 913 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 CLDN11O75508 207 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 BAIAP3O94812 1187 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 MMP2P08253 660 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 GRK2P25098 689 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 SLC6A4P31645 630 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 ARCN1P48444 511 aaKnown RBP12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 CSRP3P50461 194 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 ARFIP2P53365 341 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 DSC2Q02487 901 aa12.8□□□□□ -0.36
AC055717.2-201ENST00000561864 GNA12Q03113 381 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms